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浓聚合物溶液中与温度无关的聚合物-聚合物相互作用以及与温度相关的蛋白质-蛋白质和蛋白质-聚合物相互作用的定量表征。

Quantitative characterization of temperature-independent polymer-polymer interaction and temperature-dependent protein-protein and protein-polymer interactions in concentrated polymer solutions.

作者信息

Fodeke Adedayo A

机构信息

Department of Chemistry, Obafemi Awolowo University, 200055, Ile-Ife, Nigeria.

出版信息

Eur Biophys J. 2019 Mar;48(2):189-202. doi: 10.1007/s00249-019-01345-8. Epub 2019 Jan 11.

Abstract

To study the effect of non-specific interactions arising from proteins being in a crowded environment on physiological processes, the self-interaction of concentrated Dextran T70 and Ficoll 70 and the interactions between a dilute protein and these polymeric macromolecules were quantified using non-ideal tracer sedimentation equilibrium. Sedimentation equilibria of each polymer were measured between 5 and 37 °C, and sedimentation equilibria of 2 mg cm superoxide dismutase (SOD) in 0-0.1 g cm of each polymer was also measured. Results were analyzed using a model-free thermodynamic virial expression of activity coefficients in terms of the concentration of polymer and a structural model using a statistical thermodynamics approximation. The equilibrium gradients of each of the polymers suggest repulsive interaction, which is independent of temperature. However, the net repulsive interaction between superoxide dismutase (SOD) species and the polymers is dependent on temperature. The ratio of the solvation energy of SOD in Dextran T70 to that in Ficoll 70, lnγ(Dex)/lnγ(Fic) at the same w/v concentration was about 1.8 at 37 °C, 1.6 at the intermediate temperature, and ranges from 1.2 to 1.6 at 5 °C over the entire concentration range. The enthalpy and entropy of interaction of SOD with dilute Dextran T70 are - 14 kJ mol and - 5.6 J K mol, respectively. For SOD in dilute Ficoll 70, the enthalpy and entropy are - 8.1 kJ mol and 12.9 J K mol, respectively. Thus, Dextran T70 contributes more to the attractive protein-polymer interaction and to self-association of protein than Ficoll 70 and reasons for this are discussed.

摘要

为了研究蛋白质处于拥挤环境中产生的非特异性相互作用对生理过程的影响,使用非理想示踪剂沉降平衡对浓缩的葡聚糖T70和聚蔗糖70的自相互作用以及稀溶液中的蛋白质与这些聚合大分子之间的相互作用进行了定量分析。在5至37°C之间测量了每种聚合物的沉降平衡,还测量了在0 - 0.1 g/cm的每种聚合物中2 mg/cm超氧化物歧化酶(SOD)的沉降平衡。使用基于聚合物浓度的无模型热力学活度系数维里表达式和基于统计热力学近似的结构模型对结果进行了分析。每种聚合物的平衡梯度表明存在排斥相互作用,且该相互作用与温度无关。然而,超氧化物歧化酶(SOD)与聚合物之间的净排斥相互作用取决于温度。在相同的w/v浓度下,3�C时SOD在葡聚糖T70中的溶剂化能与在聚蔗糖70中的溶剂化能之比lnγ(Dex)/lnγ(Fic)约为1.8,在中间温度下为1.6,在5°C时,在整个浓度范围内为1.2至1.6。SOD与稀溶液中的葡聚糖T70相互作用的焓和熵分别为-14 kJ/mol和-5.6 J/(K·mol)。对于稀溶液中的聚蔗糖70中的SOD,焓和熵分别为-8.1 kJ/mol和12.9 J/(K·mol)。因此,葡聚糖T70比聚蔗糖70对蛋白质-聚合物的吸引相互作用和蛋白质的自缔合贡献更大,并对此原因进行了讨论。

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