• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

热嗜菌鱼降钙素原的结构与功能特征分析。

Structural and functional characterization of a frataxin from a thermophilic organism.

机构信息

King's College London, UK.

UK Dementia Research Institute at King's College London, UK.

出版信息

FEBS J. 2019 Feb;286(3):495-506. doi: 10.1111/febs.14750. Epub 2019 Jan 30.

DOI:10.1111/febs.14750
PMID:30636112
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6506826/
Abstract

Frataxins form an interesting family of iron-binding proteins with an almost unique fold and are highly conserved from bacteria to primates. They have a pivotal role in iron-sulfur cluster biogenesis as regulators of the rates of cluster formation, as it is testified by the fact that frataxin absence is incompatible with life and reduced levels of the protein lead to the recessive neurodegenerative disease Friedreich's ataxia. Despite its importance, the structure of frataxin has been solved only from relatively few species. Here, we discuss the X-ray structure of frataxin from the thermophilic fungus Chaetomium thermophilum, and the characterization of its interactions and dynamics in solution. We show that this eukaryotic frataxin has an unusual variation in the classical frataxin fold: the last helix is shorter than in other frataxins which results in a less symmetrical and compact structure. The stability of this protein is comparable to that of human frataxin, currently the most stable among the frataxin orthologues. We also characterized the iron-binding mode of Ct frataxin and demonstrated that it binds it through a semiconserved negatively charged ridge on the first helix and beta-strand. Moreover, this frataxin is also able to bind the bacterial ortholog of the desulfurase, which is central in iron-sulfur cluster synthesis, and act as its inhibitor.

摘要

铁载体蛋白形成了一个有趣的家族,它们具有几乎独特的折叠结构,在从细菌到灵长类动物的范围内高度保守。它们在铁硫簇生物发生中起着关键作用,作为簇形成速率的调节剂,这是由以下事实证明的:铁载体蛋白的缺失与生命不相容,并且蛋白质水平降低会导致隐性神经退行性疾病弗里德里希共济失调。尽管它很重要,但铁载体蛋白的结构仅从相对较少的物种中得到解决。在这里,我们讨论了嗜热真菌 Chaetomium thermophilum 中的铁载体蛋白的 X 射线结构,以及其在溶液中的相互作用和动力学特性的表征。我们表明,这种真核铁载体蛋白在经典铁载体蛋白折叠中具有不寻常的变化:最后一个螺旋比其他铁载体蛋白短,导致结构不太对称和紧凑。该蛋白质的稳定性可与人类铁载体蛋白相媲美,目前是铁载体蛋白同源物中最稳定的。我们还对 Ct 铁载体蛋白的铁结合模式进行了表征,并证明它通过第一个螺旋和β链上的半保守负电荷脊结合铁。此外,这种铁载体蛋白还能够结合细菌脱硫酶的同源物,该同源物在铁硫簇合成中起中心作用,并作为其抑制剂。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bcc9/6506826/00255059e37c/FEBS-286-495-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bcc9/6506826/0f1d6904b707/FEBS-286-495-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bcc9/6506826/329f697a00c4/FEBS-286-495-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bcc9/6506826/ad03453708da/FEBS-286-495-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bcc9/6506826/fa12aed7b23f/FEBS-286-495-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bcc9/6506826/fde0d76c685f/FEBS-286-495-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bcc9/6506826/873313a9439a/FEBS-286-495-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bcc9/6506826/0fbec22cfe89/FEBS-286-495-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bcc9/6506826/00255059e37c/FEBS-286-495-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bcc9/6506826/0f1d6904b707/FEBS-286-495-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bcc9/6506826/329f697a00c4/FEBS-286-495-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bcc9/6506826/ad03453708da/FEBS-286-495-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bcc9/6506826/fa12aed7b23f/FEBS-286-495-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bcc9/6506826/fde0d76c685f/FEBS-286-495-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bcc9/6506826/873313a9439a/FEBS-286-495-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bcc9/6506826/0fbec22cfe89/FEBS-286-495-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bcc9/6506826/00255059e37c/FEBS-286-495-g008.jpg

相似文献

1
Structural and functional characterization of a frataxin from a thermophilic organism.热嗜菌鱼降钙素原的结构与功能特征分析。
FEBS J. 2019 Feb;286(3):495-506. doi: 10.1111/febs.14750. Epub 2019 Jan 30.
2
Architectural Features of Human Mitochondrial Cysteine Desulfurase Complexes from Crosslinking Mass Spectrometry and Small-Angle X-Ray Scattering.基于交联质谱和小角 X 射线散射的人线粒体半胱氨酸脱硫酶复合物的结构特征。
Structure. 2018 Aug 7;26(8):1127-1136.e4. doi: 10.1016/j.str.2018.05.017. Epub 2018 Jul 5.
3
Structure and functional dynamics of the mitochondrial Fe/S cluster synthesis complex.线粒体 Fe/S 簇合成复合物的结构与功能动态
Nat Commun. 2017 Nov 3;8(1):1287. doi: 10.1038/s41467-017-01497-1.
4
A structural approach to understanding the iron-binding properties of phylogenetically different frataxins.一种用于理解系统发育上不同的共济蛋白铁结合特性的结构方法。
Hum Mol Genet. 2002 Aug 1;11(16):1865-77. doi: 10.1093/hmg/11.16.1865.
5
Ferredoxin competes with bacterial frataxin in binding to the desulfurase IscS.铁氧还蛋白与细菌 frataxin 竞争与脱硫酶 IscS 结合。
J Biol Chem. 2013 Aug 23;288(34):24777-87. doi: 10.1074/jbc.M113.480327. Epub 2013 Jul 9.
6
Bacterial frataxin CyaY is the gatekeeper of iron-sulfur cluster formation catalyzed by IscS.细菌型铁硫蛋白CyaY是由IscS催化的铁硫簇形成的守门蛋白。
Nat Struct Mol Biol. 2009 Apr;16(4):390-6. doi: 10.1038/nsmb.1579. Epub 2009 Mar 22.
7
A Highly Conserved Iron-Sulfur Cluster Assembly Machinery between Humans and Amoeba : The Characterization of Frataxin.人类和变形虫之间高度保守的铁硫簇组装机制:铁蛋白的特性。
Int J Mol Sci. 2020 Sep 17;21(18):6821. doi: 10.3390/ijms21186821.
8
Chemical shift assignment of a thermophile frataxin.嗜热型铁调素的化学位移归属
Biomol NMR Assign. 2018 Apr;12(1):113-116. doi: 10.1007/s12104-017-9790-3. Epub 2017 Oct 31.
9
Understanding the binding properties of an unusual metal-binding protein--a study of bacterial frataxin.了解一种异常金属结合蛋白的结合特性——细菌铁调素的研究
FEBS J. 2007 Aug;274(16):4199-210. doi: 10.1111/j.1742-4658.2007.05946.x. Epub 2007 Jul 25.
10
Effector role reversal during evolution: the case of frataxin in Fe-S cluster biosynthesis.在进化过程中效应器角色的反转:铁硫簇生物合成中的 frataxin 案例。
Biochemistry. 2012 Mar 27;51(12):2506-14. doi: 10.1021/bi201628j. Epub 2012 Mar 15.

引用本文的文献

1
Protein Mutations and Stability, a Link with Disease: The Case Study of Frataxin.蛋白质突变与稳定性:与疾病的关联——以弗里德赖希共济失调蛋白为例
Biomedicines. 2022 Feb 11;10(2):425. doi: 10.3390/biomedicines10020425.
2
A Highly Conserved Iron-Sulfur Cluster Assembly Machinery between Humans and Amoeba : The Characterization of Frataxin.人类和变形虫之间高度保守的铁硫簇组装机制:铁蛋白的特性。
Int J Mol Sci. 2020 Sep 17;21(18):6821. doi: 10.3390/ijms21186821.

本文引用的文献

1
Structure and functional dynamics of the mitochondrial Fe/S cluster synthesis complex.线粒体 Fe/S 簇合成复合物的结构与功能动态
Nat Commun. 2017 Nov 3;8(1):1287. doi: 10.1038/s41467-017-01497-1.
2
Chemical shift assignment of a thermophile frataxin.嗜热型铁调素的化学位移归属
Biomol NMR Assign. 2018 Apr;12(1):113-116. doi: 10.1007/s12104-017-9790-3. Epub 2017 Oct 31.
3
Structure of human Fe-S assembly subcomplex reveals unexpected cysteine desulfurase architecture and acyl-ACP-ISD11 interactions.人 Fe-S 组装亚基的结构揭示了出乎意料的半胱氨酸脱硫酶结构和酰基-ACP-ISD11 相互作用。
Proc Natl Acad Sci U S A. 2017 Jul 3;114(27):E5325-E5334. doi: 10.1073/pnas.1702849114. Epub 2017 Jun 20.
4
The Eukaryotic-Specific ISD11 Is a Complex-Orphan Protein with Ability to Bind the Prokaryotic IscS.真核生物特有的ISD11是一种具有结合原核生物IscS能力的复杂孤儿蛋白。
PLoS One. 2016 Jul 18;11(7):e0157895. doi: 10.1371/journal.pone.0157895. eCollection 2016.
5
Structural characterization of metal binding to a cold-adapted frataxin.金属与冷适应型共济失调蛋白结合的结构表征
J Biol Inorg Chem. 2015 Jun;20(4):653-64. doi: 10.1007/s00775-015-1251-9. Epub 2015 Apr 2.
6
Genetic approaches of the Fe-S cluster biogenesis process in bacteria: Historical account, methodological aspects and future challenges.
Biochim Biophys Acta. 2015 Jun;1853(6):1429-35. doi: 10.1016/j.bbamcr.2014.12.024. Epub 2014 Dec 23.
7
Frataxin: a protein in search for a function.铁蛋白:一种寻找功能的蛋白质。
J Neurochem. 2013 Aug;126 Suppl 1:43-52. doi: 10.1111/jnc.12220.
8
Ferredoxin competes with bacterial frataxin in binding to the desulfurase IscS.铁氧还蛋白与细菌 frataxin 竞争与脱硫酶 IscS 结合。
J Biol Chem. 2013 Aug 23;288(34):24777-87. doi: 10.1074/jbc.M113.480327. Epub 2013 Jul 9.
9
How good are my data and what is the resolution?我的数据质量如何,分辨率是多少?
Acta Crystallogr D Biol Crystallogr. 2013 Jul;69(Pt 7):1204-14. doi: 10.1107/S0907444913000061. Epub 2013 Jun 13.
10
Persulfide formation on mitochondrial cysteine desulfurase: enzyme activation by a eukaryote-specific interacting protein and Fe-S cluster synthesis.巯基亚硫酸盐在线粒体半胱氨酸脱硫酶上的形成:真核生物特有的相互作用蛋白对酶的激活作用和 Fe-S 簇的合成。
Biochem J. 2012 Dec 1;448(2):171-87. doi: 10.1042/BJ20120951.