Yang Endong, Sun Leni, Ding Xiaoyuan, Sun Dongdong, Liu Jing, Wang Weiyun
School of Life Science, Anhui Agricultural University, Hefei, 230036 People's Republic of China.
3 Biotech. 2019 Feb;9(2):42. doi: 10.1007/s13205-019-1569-z. Epub 2019 Jan 14.
RHGG3, a novel type species in the genus , originally isolated from rhizosphere soil of watermelon (), has the ability to improve the growth of watermelon seedling and tolerate heavy metals. In vitro, RHGG3 was able to solubilize phosphate (80.56 mg L), produce indole-3-acetic acid (IAA) (11.58 mg L) and was resistant to multiple heavy metals (copper, zinc, cadmium, cobalt and lead). Inoculating watermelon with this strain increased shoot and root length by 22.1% and 43.7%, respectively, and the total number of lateral roots by 55.9% compared to non-inoculated watermelon. In this study, we present the complete genome sequence of RHGG3, which was comprised of a single circular chromosome of 5,659,202 bp with a G + C content of 69.25%. An annotation analysis revealed that the RHGG3 genome contained 5172 coding DNA sequences, 9 rRNA and 55 tRNA genes. Genes related to plant growth promotion (PGP), such as those associated with phosphate solubilization, nitrogen fixation, IAA, phenazine, volatile compounds, spermidine and cobalamin synthesis, were found in the RHGG3 genome. Some genes responsible for heavy metal tolerance were also identified. The genome sequence of strain RHGG3 reported here provides new insight into the molecular mechanisms underlying the promotion of plant growth and the resistance to heavy metals in . This study will be valuable for further exploration of the biotechnological applications of strain RHGG3 in agriculture.
RHGG3是该属中的一个新型物种,最初从西瓜()的根际土壤中分离出来,具有促进西瓜幼苗生长和耐受重金属的能力。在体外,RHGG3能够溶解磷酸盐(80.56毫克/升),产生吲哚-3-乙酸(IAA)(11.58毫克/升),并且对多种重金属(铜、锌、镉、钴和铅)具有抗性。与未接种的西瓜相比,用该菌株接种西瓜可使地上部和根部长度分别增加22.1%和43.7%,侧根总数增加55.9%。在本研究中,我们展示了RHGG3的完整基因组序列,其由一条5,659,202 bp的单环状染色体组成,G + C含量为69.25%。注释分析表明,RHGG3基因组包含5172个编码DNA序列、9个rRNA和55个tRNA基因。在RHGG3基因组中发现了与植物生长促进(PGP)相关的基因,例如那些与磷酸盐溶解、固氮、IAA、吩嗪、挥发性化合物、亚精胺和钴胺素合成相关的基因。还鉴定了一些负责重金属耐受性的基因。本文报道的菌株RHGG3的基因组序列为该菌促进植物生长和抗重金属的分子机制提供了新的见解。这项研究对于进一步探索菌株RHGG3在农业中的生物技术应用具有重要价值。