Amini Mohammad, Foroughi Kobra, Talebi Fatemeh, Aghagolzade Haji Hemat, Kamali Fatemeh, Jandaghi Pouria, Hoheisel Jörg D, Manoochehri Mehdi
School of Medicine, Shahroud University of Medical Sciences, Shahroud, Iran.
Department of Biochemistry, Faculty of Medicine, Babol University of Medical Sciences, Babol, Iran.
J Cell Physiol. 2019 Sep;234(9):15320-15329. doi: 10.1002/jcp.28179. Epub 2019 Jan 24.
Aberrations of DNA methylation are early events in the development of tumors. In this study, we investigated the DNA methylation status of growth hormone secretagogue receptor (GHSR), a promising pan-cancer biomarker, in gastric cancer (GC). Initially, data sets from DNA methylation and gene expression studies available at Gene Expression Omnibus (GEO) were analyzed. Confirmation was done on primary tumor specimens and adjacent normal stomach tissue samples. Both analyses showed significant hypermethylation of GHSR. For further validation, The Cancer Genome Atlas data on stomach cancer was used. A receiver operating characteristic curve analysis yielded an area under the curve value of 0.85, corroborating its usefulness as a diagnostic marker. A genome-wide comethylation analysis revealed several correlated genes. CREB1 was found to act as an upstream regulator of this gene network. Furthermore, GHSR methylation was found to be a biomarker in several other tumor entities, namely cancers of the bladder, endometrium, esophagus, head and neck, liver, thyroid, kidney, and ovary. Our findings along with previous reports on other types of cancer suggest a high potential of GHSR gene methylation as a pan-cancer biomarker, which could be considered for liquid biopsy applications.
DNA甲基化异常是肿瘤发生发展过程中的早期事件。在本研究中,我们调查了生长激素促分泌素受体(GHSR)在胃癌(GC)中的DNA甲基化状态,GHSR是一种很有前景的泛癌生物标志物。首先,对基因表达综合数据库(GEO)中可获取的DNA甲基化和基因表达研究数据集进行了分析。在原发性肿瘤标本和相邻的正常胃组织样本上进行了验证。两项分析均显示GHSR存在显著的高甲基化。为了进一步验证,使用了癌症基因组图谱中关于胃癌的数据。一项受试者工作特征曲线分析得出曲线下面积值为0.85,证实了其作为诊断标志物的有效性。全基因组共甲基化分析揭示了几个相关基因。发现CREB1作为该基因网络的上游调节因子。此外,发现GHSR甲基化在其他几种肿瘤实体中也是一种生物标志物,即膀胱癌、子宫内膜癌、食管癌、头颈癌、肝癌、甲状腺癌、肾癌和卵巢癌。我们的研究结果以及之前关于其他类型癌症的报道表明,GHSR基因甲基化作为一种泛癌生物标志物具有很高的潜力,可考虑用于液体活检应用。