Meng Xiang-Yu, Shi Ming-Jun, Zeng Zi-Hang, Chen Chen, Liu Tong-Zu, Wu Qiu-Ji, Li Shuo, Li Sheng
Department of Urology, Zhongnan Hospital of Wuhan University, Wuhan, China.
Institut Curie, PSL Research University, CNRS, UMR 144, Paris, France.
Front Oncol. 2019 Jan 15;8:659. doi: 10.3389/fonc.2018.00659. eCollection 2018.
Bladder cancer (BC) is one of the most common malignancies. Two previous studies identified collagen type V alpha 2 (COL5A2) as a potential biomarker in BC, both are simple reanalysis of a single transcriptomic dataset without subgroup analysis for muscle-invasive BC (MIBC). We focused in MIBC patients and explored the role of COL5A2 from an integration perspective, using refined methodology covering individual participant data meta-analysis and bioinformatics analysis. Eight transcriptomic datasets of 787 MIBC patients (including one dataset containing genomic mutation information) and two drug sensitivity datasets of 29 cell lines in which more than 250 compounds were analyzed. We found subjects with increased COL5A2 gene expression exhibited poorer prognosis, and the power analysis confirmed adequate sample size. FGFR3 was the only gene differential mutated between the COL5A2 high and low expression groups. Differential expression and co-expression network analysis suggested potential association between COL5A2 expression and essential pathways involved in cancer invasion and dissemination, including cell adhesion, extracellular matrix organization, and epithelial-mesenchymal transition. Coordinately, analysis of drug screening datasets and gene-drug interaction also revealed COL5A2 expression linked to cell morphogenesis, angiogenesis, blood vessel development, and urogenital development. The utility and feasibility of COL5A2 for clinically applicable prognosis prediction and risk classification and the exact underlying molecular mechanism should be further investigated in subsequent studies.
膀胱癌(BC)是最常见的恶性肿瘤之一。此前两项研究将Ⅴ型胶原蛋白α2(COL5A2)鉴定为膀胱癌的一种潜在生物标志物,但这两项研究均只是对单个转录组数据集进行简单的重新分析,并未对肌层浸润性膀胱癌(MIBC)进行亚组分析。我们聚焦于MIBC患者,从整合的角度探讨COL5A2的作用,采用了涵盖个体参与者数据荟萃分析和生物信息学分析的精细方法。纳入了787例MIBC患者的8个转录组数据集(包括一个包含基因突变信息的数据集)以及29个细胞系的两个药物敏感性数据集,其中分析了250多种化合物。我们发现COL5A2基因表达升高的患者预后较差,效能分析证实样本量充足。FGFR3是COL5A2高表达组和低表达组之间唯一发生差异突变的基因。差异表达和共表达网络分析表明COL5A2表达与癌症侵袭和播散所涉及的关键通路之间存在潜在关联,包括细胞黏附、细胞外基质组织和上皮-间质转化。同时,药物筛选数据集分析和基因-药物相互作用分析也显示COL5A2表达与细胞形态发生、血管生成、血管发育和泌尿生殖系统发育有关。COL5A2在临床适用的预后预测和风险分类中的实用性和可行性以及确切的潜在分子机制应在后续研究中进一步探讨。