• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

从喜马拉雅西北部塔塔帕尼温泉分离出的嗜热耐盐类芽孢杆菌Toebii PW12的基因组草图序列

Draft Genome Sequence of Hyperthermophilic, Halotolerant Parageobacillus toebii PW12, Isolated from the Tattapani Hot Spring, Northwest Himalayas.

作者信息

Sharma Parul, Gupta Sonika, Sourirajan Anuradha, Baumler David J, Dev Kamal

机构信息

Faculty of Applied Sciences and Biotechnology, Shoolini University, Solan, Himachal Pradesh, India.

Department of Food Science and Nutrition, University of Minnesota-Twin Cities, St. Paul, Minnesota, USA.

出版信息

Microbiol Resour Announc. 2019 Jan 24;8(4). doi: 10.1128/MRA.01163-18. eCollection 2019 Jan.

DOI:10.1128/MRA.01163-18
PMID:30701231
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6346180/
Abstract

Here, we report the genome sequence of hyperthermophilic and halophilic PW12, isolated from the Tattapani hot spring in the northwest Himalayas. The genome size of PW12 is 3,210,377 bp. The G+C content is 42.05%, and 3,382 coding sequences (CDS), 80 tRNAs, 5 noncoding RNAs (ncRNAs), and 4 CRISPR arrays were predicted.

摘要

在此,我们报告了从喜马拉雅西北部的塔塔帕尼温泉中分离出的嗜热嗜盐菌PW12的基因组序列。PW12的基因组大小为3,210,377 bp。G+C含量为42.05%,预测有3382个编码序列(CDS)、80个tRNA、5个非编码RNA(ncRNA)和4个CRISPR阵列。

相似文献

1
Draft Genome Sequence of Hyperthermophilic, Halotolerant Parageobacillus toebii PW12, Isolated from the Tattapani Hot Spring, Northwest Himalayas.从喜马拉雅西北部塔塔帕尼温泉分离出的嗜热耐盐类芽孢杆菌Toebii PW12的基因组草图序列
Microbiol Resour Announc. 2019 Jan 24;8(4). doi: 10.1128/MRA.01163-18. eCollection 2019 Jan.
2
Draft Genome Sequence of Halobacillus trueperi SS1, Isolated from Lunsu, a Saltwater Body in the Northwest Himalayas.从喜马拉雅西北部咸水体伦苏分离出的特鲁氏嗜盐芽孢杆菌SS1的基因组草图序列
Microbiol Resour Announc. 2019 Mar 7;8(10). doi: 10.1128/MRA.01710-18. eCollection 2019 Mar.
3
Methylome and Complete Genome Sequence of Parageobacillus toebii DSM 14590, a Thermophilic Bacterium.嗜热细菌托伊比嗜热栖热菌DSM 14590的甲基化组和全基因组序列
Microbiol Resour Announc. 2020 Jun 18;9(25):e00589-20. doi: 10.1128/MRA.00589-20.
4
Draft Genome Sequence of Strain MB4, a Sulfur-Utilizing Aerobic Thermophile Isolated from a Hot Spring in Tattapani, Central India.菌株MB4的基因组草图序列,MB4是从印度中部塔塔帕尼的一个温泉中分离出的一种利用硫的嗜氧嗜热菌。
Genome Announc. 2017 Mar 2;5(9):e01709-16. doi: 10.1128/genomeA.01709-16.
5
Cellulolytic Activity of Thermophilic Bacilli Isolated from Tattapani Hot Spring Sediment in North West Himalayas.从喜马拉雅西北部塔塔帕尼温泉沉积物中分离出的嗜热芽孢杆菌的纤维素分解活性
Indian J Microbiol. 2016 Jun;56(2):228-231. doi: 10.1007/s12088-016-0578-4. Epub 2016 Apr 9.
6
High Quality Draft Genomes of the Type Strains thermocatenulatus DSM 730, DSM 23175 And DSM 18751.嗜热链菌DSM 730、DSM 23175和DSM 18751模式菌株的高质量基因组草图
J Genomics. 2018 Feb 3;6:20-23. doi: 10.7150/jgen.22986. eCollection 2018.
7
Draft Genome Sequence of sp. Strain LEMMJ03, Isolated from an Antarctic Volcano.从南极火山分离出的[具体菌种名称]菌株LEMMJ03的基因组序列草图
Microbiol Resour Announc. 2019 Oct 3;8(40):e00921-19. doi: 10.1128/MRA.00921-19.
8
Genome Sequence of Litorilinea aerophila, an Icelandic Intertidal Hot Springs Bacterium.冰岛潮间带温泉细菌嗜水气单胞菌的基因组序列。
Microbiol Resour Announc. 2022 Feb 17;11(2):e0120621. doi: 10.1128/MRA.01206-21. Epub 2022 Jan 27.
9
Complete genome sequence data of tropical thermophilic bacterium ER4B.嗜热热带细菌ER4B的全基因组序列数据
Data Brief. 2021 Dec 25;40:107764. doi: 10.1016/j.dib.2021.107764. eCollection 2022 Feb.
10
Genome Sequence of Listeria innocua Strain MEZLIS26, Isolated from a Goat in South Africa.从南非一只山羊身上分离出的无害李斯特菌MEZLIS26菌株的基因组序列。
Microbiol Resour Announc. 2019 Oct 31;8(44):e00991-19. doi: 10.1128/MRA.00991-19.

引用本文的文献

1
Bacterial diversity in 110 thermal hot springs of Indian Himalayan Region (IHR).印度喜马拉雅地区(IHR)110个温泉中的细菌多样性。
3 Biotech. 2022 Sep;12(9):238. doi: 10.1007/s13205-022-03270-8. Epub 2022 Aug 21.
2
Genomic Analysis Provides New Insights Into Biotechnological and Industrial Potential of M1.基因组分析为深入了解M1的生物技术和工业潜力提供了新的见解。
Front Microbiol. 2022 Jun 9;13:923038. doi: 10.3389/fmicb.2022.923038. eCollection 2022.

本文引用的文献

1
RefSeq: an update on prokaryotic genome annotation and curation.RefSeq:原核生物基因组注释和管理的最新进展。
Nucleic Acids Res. 2018 Jan 4;46(D1):D851-D860. doi: 10.1093/nar/gkx1068.
2
MISA-web: a web server for microsatellite prediction.MISA-web:一个用于微卫星预测的网络服务器。
Bioinformatics. 2017 Aug 15;33(16):2583-2585. doi: 10.1093/bioinformatics/btx198.
3
Phylogenomic re-assessment of the thermophilic genus Geobacillus.嗜热栖热放线菌属的系统基因组学重新评估
Syst Appl Microbiol. 2016 Dec;39(8):527-533. doi: 10.1016/j.syapm.2016.09.004. Epub 2016 Oct 4.
4
NCBI prokaryotic genome annotation pipeline.美国国立生物技术信息中心原核生物基因组注释管道
Nucleic Acids Res. 2016 Aug 19;44(14):6614-24. doi: 10.1093/nar/gkw569. Epub 2016 Jun 24.
5
The genus Geobacillus and their biotechnological potential.嗜热栖热菌属及其生物技术潜力。
Adv Appl Microbiol. 2015;92:1-48. doi: 10.1016/bs.aambs.2015.03.001. Epub 2015 May 5.
6
The Geobacillus paradox: why is a thermophilic bacterial genus so prevalent on a mesophilic planet?耐高热菌悖论:为何嗜温星球上会如此普遍存在嗜热细菌属?
Microbiology (Reading). 2014 Jan;160(Pt 1):1-11. doi: 10.1099/mic.0.071696-0. Epub 2013 Oct 1.
7
SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler.SOAPdenovo2:一种经验丰富的、内存效率高的短读长从头组装器。
Gigascience. 2012 Dec 27;1(1):18. doi: 10.1186/2047-217X-1-18.
8
Purification and characterization of thermostable xylanase and beta-xylosidase by the thermophilic bacterium Bacillus thermantarcticus.嗜热南极芽孢杆菌对热稳定木聚糖酶和β-木糖苷酶的纯化及特性研究
Res Microbiol. 2004 May;155(4):283-9. doi: 10.1016/j.resmic.2004.02.001.
9
Developments in the use of Bacillus species for industrial production.芽孢杆菌属在工业生产中的应用进展。
Can J Microbiol. 2004 Jan;50(1):1-17. doi: 10.1139/w03-076.
10
Taxonomic study of aerobic thermophilic bacilli: descriptions of Geobacillus subterraneus gen. nov., sp. nov. and Geobacillus uzenensis sp. nov. from petroleum reservoirs and transfer of Bacillus stearothermophilus, Bacillus thermocatenulatus, Bacillus thermoleovorans, Bacillus kaustophilus, Bacillus thermodenitrificans to Geobacillus as the new combinations G. stearothermophilus, G. th.嗜热需氧芽孢杆菌的分类学研究:地下嗜热栖热菌新属、新种及乌津嗜热栖热菌新种的描述,从石油储层分离,以及嗜热脂肪芽孢杆菌、热链芽孢杆菌、嗜热油芽孢杆菌、嗜碱芽孢杆菌、热脱硝芽孢杆菌转移至嗜热栖热菌属成为新组合嗜热脂肪栖热菌、嗜热链栖热菌等。
Int J Syst Evol Microbiol. 2001 Mar;51(Pt 2):433-46. doi: 10.1099/00207713-51-2-433.