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分别从下呼吸道感染和水中分离出的约旦军团菌菌株NML 060502和NML 130005的全基因组测序

Whole-Genome Sequencing of Legionella jordanis Strains NML 060502 and NML 130005, Recovered from a Lower Respiratory Tract Infection and Water, Respectively.

作者信息

Bernier Anne-Marie, Bernard Kathryn

机构信息

Department of Biology, Université de Saint-Boniface, Winnipeg, Canada.

National Microbiology Laboratory (NML)-CSCHAH Site, Public Health Agency of Canada, Winnipeg, Canada.

出版信息

Microbiol Resour Announc. 2019 Jan 24;8(4). doi: 10.1128/MRA.01537-18. eCollection 2019 Jan.

DOI:10.1128/MRA.01537-18
PMID:30701246
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6346195/
Abstract

Draft genome sequences of two strains of the rarely isolated organism Legionella jordanis, NML 060502 (from a patient with a lower respiratory infection) and NML 130005 (from water), were assembled and studied. Respectively, the genome sizes obtained were 2,927,328 bp and 3,101,130 bp, with G+C contents of 41.9% and 41.7%.

摘要

对两株罕见分离菌约旦军团菌(NML 060502,分离自一名下呼吸道感染患者;NML 130005,分离自水)的基因组序列草图进行了组装和研究。获得的基因组大小分别为2,927,328 bp和3,101,130 bp,G+C含量分别为41.9%和41.7%。

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本文引用的文献

1
Fast Genome-Wide Functional Annotation through Orthology Assignment by eggNOG-Mapper.通过eggNOG-Mapper进行直系同源物分配实现全基因组快速功能注释
Mol Biol Evol. 2017 Aug 1;34(8):2115-2122. doi: 10.1093/molbev/msx148.
2
PHASTER: a better, faster version of the PHAST phage search tool.PHASTER:PHAST噬菌体搜索工具的一个更好、更快的版本。
Nucleic Acids Res. 2016 Jul 8;44(W1):W16-21. doi: 10.1093/nar/gkw387. Epub 2016 May 3.
3
Genomic analysis of 38 Legionella species identifies large and diverse effector repertoires.对38种军团菌的基因组分析确定了庞大且多样的效应蛋白库。
Nat Genet. 2016 Feb;48(2):167-75. doi: 10.1038/ng.3481. Epub 2016 Jan 11.
4
JSpeciesWS: a web server for prokaryotic species circumscription based on pairwise genome comparison.JSpeciesWS:一个基于成对基因组比较进行原核生物物种界定的网络服务器。
Bioinformatics. 2016 Mar 15;32(6):929-31. doi: 10.1093/bioinformatics/btv681. Epub 2015 Nov 16.
5
Prokka: rapid prokaryotic genome annotation.Prokka:快速的原核生物基因组注释。
Bioinformatics. 2014 Jul 15;30(14):2068-9. doi: 10.1093/bioinformatics/btu153. Epub 2014 Mar 18.
6
Genome sequence-based species delimitation with confidence intervals and improved distance functions.基于基因组序列的具有置信区间和改进距离函数的物种界定。
BMC Bioinformatics. 2013 Feb 21;14:60. doi: 10.1186/1471-2105-14-60.
7
SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing.SPAdes:一种新的基因组组装算法及其在单细胞测序中的应用
J Comput Biol. 2012 May;19(5):455-77. doi: 10.1089/cmb.2012.0021. Epub 2012 Apr 16.
8
FLASH: fast length adjustment of short reads to improve genome assemblies.FLASH:快速调整短读长以提高基因组组装质量。
Bioinformatics. 2011 Nov 1;27(21):2957-63. doi: 10.1093/bioinformatics/btr507. Epub 2011 Sep 7.
9
Legionella jordanis lower respiratory tract infection: case report and review.约旦军团菌引起的下呼吸道感染:病例报告与文献复习
J Clin Microbiol. 2007 Jul;45(7):2321-3. doi: 10.1128/JCM.00314-07. Epub 2007 May 9.
10
Legionella jordanis: a new species of Legionella isolated from water and sewage.约旦军团菌:一种从水和污水中分离出的新型军团菌。
J Clin Microbiol. 1982 Feb;15(2):290-7. doi: 10.1128/jcm.15.2.290-297.1982.