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高分辨率指纹分析提示科威特新生儿重症监护病房患者中近平滑念珠菌感染的持续性和传播性。

High-resolution fingerprinting of Candida parapsilosis isolates suggests persistence and transmission of infections among neonatal intensive care unit patients in Kuwait.

机构信息

Department of Microbiology, Faculty of Medicine, Kuwait University, Jabriya, Kuwait.

Department of Medical Mycology, Westerdijk Fungal Biodiversity Institute, Utrecht, Netherlands.

出版信息

Sci Rep. 2019 Feb 4;9(1):1340. doi: 10.1038/s41598-018-37855-2.

Abstract

Candida parapsilosis causes ~35% of all candidemia cases in neonates. High-resolution fingerprinting of C. parapsilosis isolates from neonatal intensive care unit (NICU) patients in Maternity Hospital (MH) was performed to identify epidemiologically related strains. Sixty-eight bloodstream/colonizing strains isolated from 59 NICU patients, two isolates from health care workers (HCWs) from MH and 18 bloodstream isolates from two other hospitals were used. Six microsatellite markers were employed, isolates were assigned a numerical microsatellite genotype (MSG), dendrogram was constructed and similarities between genotypes were visualized by minimum spanning tree. Fifty bloodstream isolates from MH yielded 37 MSGs with 20 isolates clustering in 7 MSGs. Duplicate isolates and colonizing strains yielded same/highly similar MSG as bloodstream isolates. Colonizing strains from two non-candidemia patients yielded unique MSGs while others belonged to a cluster. All isolates from HCWs and from two other hospitals belonged to unique MSGs. Cluster isolates came from patients in NICU-1 or from neonates in NICU-1 and other NICUs. Clonal complexes comprising closely related genotypes indicative of microevolution were also detected. Our data show that some C. parapsilosis strains have persisted in MH environment over several years and these endemic genotypes were transmitted to other patients in NICU-1 and/or other nearby NICUs.

摘要

近平滑假丝酵母菌引起约 35%的新生儿血流感染病例。对来自妇产科医院新生儿重症监护病房(NICU)患者的近平滑假丝酵母菌分离株进行高分辨率指纹图谱分析,以鉴定流行病学相关菌株。从 59 名 NICU 患者、2 名来自妇产科医院医护人员(HCW)的患者和 2 名来自其他两家医院的患者中共分离出 68 株血流/定植株。使用了 6 个微卫星标记物,将分离株分配给数值微卫星基因型(MSG),通过最小生成树构建了聚类图并可视化了基因型之间的相似度。从妇产科医院的 50 株血流分离株中获得了 37 个 MSG,其中 20 个分离株聚集成 7 个 MSG。重复分离株和定植株与血流分离株产生相同/高度相似的 MSG。来自两名非念珠菌血症患者的定植株产生了独特的 MSG,而其他定植株则属于一个聚类。所有来自 HCW 和来自另外两家医院的分离株都属于独特的 MSG。聚类分离株来自 NICU-1 中的患者或来自 NICU-1 和其他 NICU 的新生儿。还检测到了包含提示微进化的密切相关基因型的克隆复合体。我们的数据表明,一些近平滑假丝酵母菌菌株在妇产科医院环境中持续存在了数年,这些地方性基因型被传播到 NICU-1 和/或其他附近 NICU 的其他患者中。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4edb/6361955/0c774897d36d/41598_2018_37855_Fig1_HTML.jpg

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