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多基因序列分型的分子指纹图谱鉴定了科威特 的微进化和医院感染传播。

Molecular fingerprinting by multi-locus sequence typing identifies microevolution and nosocomial transmission of in Kuwait.

机构信息

Department of Microbiology, College of Medicine, Kuwait University, Jabriya, Kuwait.

出版信息

Front Public Health. 2023 Sep 8;11:1242622. doi: 10.3389/fpubh.2023.1242622. eCollection 2023.

Abstract

BACKGROUNDS

is a frequently isolated non- species and invasive infections in older patients are associated with high mortality rates. Opportunistic infections in critically ill patients may be either endogenous or nosocomial in origin and this distinction is critical for effective intervention strategies. This study performed multi-locus sequence typing (MLST) to study genotypic relatedness among clinical isolates in Kuwait.

METHODS

isolates ( = 91) cultured from 91 patients were analyzed by MLST. Repeat isolates ( = 16) from 9 patients were also used. Antifungal susceptibility testing for fluconazole, voriconazole, caspofungin and amphotericin B (AMB) was determined by Etest. Genetic relatedness was determined by constructing phylogenetic tree and minimum spanning tree by using BioNumerics software.

RESULTS

Resistance to fluconazole, voriconazole and AMB was detected in 7, 2 and 10 isolates, respectively. MLST identified 28 sequence types (STs), including 12 new STs. ST46 ( = 33), ST3 ( = 8), ST7 ( = 6) and ST55 ( = 6) were prevalent in ≥4 hospitals. Repeat isolates obtained from same or different site yielded identical ST. No association of ST46 with source of isolation or resistance to antifungals was apparent. Microevolution and cross-transmission of infection was indicated in two hospitals that yielded majority (57 of 91, 67%) of .

CONCLUSION

Our data suggest that undergoes microevolution in hospital environment and can be nosocomially transmitted to other susceptible patients. Thus, proper infection control practices during routine procedures on -infected patients may prevent transmission of this pathogen to other hospitalized patients.

摘要

背景

是一种经常分离的非种属,侵袭性感染,在老年患者中与高死亡率相关。重症患者的机会性感染可能是内源性或医院获得性的,这种区别对于有效的干预策略至关重要。本研究通过多位点序列分型(MLST)对科威特临床分离株的基因型相关性进行了研究。

方法

对 91 例患者培养的 91 株分离株进行 MLST 分析。来自 9 例患者的重复分离株( = 16)也被使用。氟康唑、伏立康唑、卡泊芬净和两性霉素 B(AMB)的抗真菌药敏试验通过 Etest 进行。通过使用 BioNumerics 软件构建系统发育树和最小生成树来确定遗传相关性。

结果

7、2 和 10 株分离株分别对氟康唑、伏立康唑和 AMB 耐药。MLST 鉴定了 28 种序列型(STs),包括 12 种新的 STs。ST46( = 33)、ST3( = 8)、ST7( = 6)和 ST55( = 6)在≥4 家医院中流行≥4 株。从同一或不同部位获得的重复分离株产生相同的 ST。ST46 与分离源或抗真菌药物耐药性之间没有明显的关联。两所医院显示出微进化和感染的交叉传播,这两所医院产生了 (91 株中的 57 株,67%)。

结论

我们的数据表明,在医院环境中经历微进化,并且可以在医院内传播给其他易感患者。因此,在对感染患者进行常规操作时,采取适当的感染控制措施可能会防止这种病原体传播给其他住院患者。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7524/10515652/cbe73aee5076/fpubh-11-1242622-g001.jpg

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