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嗜中鞘氨醇单胞菌新种的描述,从天麻中分离得到。

Description of Sphingomonas mesophila sp. nov., isolated from Gastrodia elata Blume.

作者信息

Li Yan-Qiong, Narsing Rao Manik Prabhu, Zhang Hui, Guo Yan-Mei, Dong Zhou-Yan, Alkhalifah Dalal Hussien M, Hozzein Wael N, Xiao Min, Li Wen-Jun

机构信息

Kunming Medical University Haiyuan College, Kunming, 650106, PR China.

State Key Laboratory of Biocontrol and Guangdong Provincial Key Laboratory of Plant Resources, School of Life Sciences, Sun Yat- Sen University, Guangzhou, PR China.

出版信息

Int J Syst Evol Microbiol. 2019 Apr;69(4):1030-1034. doi: 10.1099/ijsem.0.003263. Epub 2019 Feb 8.

Abstract

A Gram-staining-negative, strictly aerobic, non-motile strain, SYSUP0001, was isolated from tubers of Gastrodia elata Blume. The 16S rRNA gene sequence result indicated that SYSUP0001 represents a member of the genus Sphingomonas, with the highest sequence similarity (97.7 %) to the type strain of Sphingomonasginsengisoli. SYSUP0001 grew at 14-37 °C and pH 6-8, with optimum growth at 28 °C and pH 7. Tolerance to NaCl was up to 3 % (w/v) with optimum growth in the absence of NaCl. The respiratory quinone was Q-10. The major fatty acids were C18 : 1ω7c, Summed feature 3 (C16 : 1ω7c/C16 : 1ω6c), and C16 : 0. The polar lipids were diphosphatidylglycerol (DPG), phosphatidylethanolamine (PE), phosphatidylglycerol (PG), sphingoglycolipid (SGL), phosphatidylcholine (PC) and four unidentified polar lipids (L). The DNA G+C content was 67.5 %. The average nucleotide identity (ANI) values between SYSUP0001 and closely related members of the genus Sphingomonas were below the cut-off level (95-96 %) for species delineation. On the basis of the phenotypic, phylogenetic and chemotaxonomic characterizations, SYSUP0001 represents a novel species of the genus Sphingomonas, for which the name Sphingomonasmesophila sp. nov. is proposed. The type strain is SYSUP0001 (=KCTC 62179 =CGMCC 1.16462).

摘要

从天麻块茎中分离出一株革兰氏染色阴性、严格需氧、不运动的菌株SYSUP0001。16S rRNA基因序列结果表明,SYSUP0001属于鞘氨醇单胞菌属,与人参鞘氨醇单胞菌模式菌株的序列相似性最高(97.7%)。SYSUP0001在14 - 37°C和pH 6 - 8条件下生长,最适生长温度为28°C,最适pH为7。对NaCl的耐受性高达3%(w/v),在无NaCl条件下生长最佳。呼吸醌为Q - 10。主要脂肪酸为C18:1ω7c、特征性总和3(C16:1ω7c/C16:1ω6c)和C16:0。极性脂为双磷脂酰甘油(DPG)、磷脂酰乙醇胺(PE)、磷脂酰甘油(PG)、鞘糖脂(SGL)、磷脂酰胆碱(PC)和四种未鉴定的极性脂(L)。DNA G + C含量为67.5%。SYSUP0001与鞘氨醇单胞菌属密切相关成员之间的平均核苷酸同一性(ANI)值低于物种划分的截止水平(95 - 96%)。基于表型、系统发育和化学分类特征,SYSUP0001代表鞘氨醇单胞菌属的一个新物种,为此提出名为嗜中温鞘氨醇单胞菌(Sphingomonas mesophila sp. nov.)。模式菌株为SYSUP0001(=KCTC 62179 =CGMCC 1.16462)。

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