Zhang Dao-Feng, Cui Xi-Wen, Zhao Zhe, Zhang Ai-Hua, Huang Jian-Ke, Li Wen-Jun
Institute of Marine Biology, College of Oceanography, Hohai University, Nanjing, People's Republic of China.
State Key Laboratory of Biocontrol and Guangdong Provincial Key Laboratory of Plant Resources, School of Life Sciences, Sun Yat-Sen University, Guangzhou, 510275, People's Republic of China.
Antonie Van Leeuwenhoek. 2020 Oct;113(10):1523-1530. doi: 10.1007/s10482-020-01460-z. Epub 2020 Aug 11.
A Gram-stain-negative, aerobic, motile strain, HHU CXW, was isolated from hair of a healthy 21-year-old female student of Hohai University, Nanjing, China. The 16S rRNA gene sequence analysis indicated that HHU CXW represents a member of the genus Sphingomonas with the highest sequence similarity (97.6%) to the type strain S. aquatilis JSS7. HHU CXW grew at 4-35 °C and pH 6-8, with optimum growth at 28 °C and pH 7. Tolerance to NaCl was up to 2% (w/v) with optimum growth in 0.5-1.0% NaCl. The major fatty acids were C, Cω6c, Cω7c11-methyl, summed feature 3 (Cω7c and/or Cω6c), and summed feature 8 (Cω7c and/or Cω6c). The predominant isoprenoid quinone was ubiquinone-10. The polar lipids were diphosphatidylglycerol (DPG), phosphatidylethanolamine (PE), phosphatidylglycerol (PG), sphingoglycolipid (SGL), phosphatidylinositol mannosides (PIM), and an unidentified glycolipid (GL). The DNA G + C content was 67.1%. The average nucleotide identity (ANI) values and digital DNA-DNA hybridization (dDDH) between HHU CXW and closely related members of the genus Sphingomonas were all below the cut-off level (95-96% and 70%, respectively) for species delineation. On the basis of the phenotypic, phylogenetic and chemotaxonomic characterizations, HHU CXW represents a novel species of the genus Sphingomonas, for which the name Sphingomonas hominis sp. nov. is proposed. The type strain is HHU CXW (= KCTC 72946 = CGMCC 1.17504 = MCCC 1K04223).
从中国南京河海大学一名21岁健康女学生的头发中分离出一株革兰氏阴性、需氧、运动性菌株HHU CXW。16S rRNA基因序列分析表明,HHU CXW代表鞘氨醇单胞菌属的一个成员,与模式菌株水生鞘氨醇单胞菌JSS7的序列相似性最高(97.6%)。HHU CXW在4-35°C和pH 6-8条件下生长,最适生长温度为28°C,最适pH为7。对NaCl的耐受性高达2%(w/v),在0.5-1.0% NaCl中生长最佳。主要脂肪酸为C、Cω6c、Cω7c 11-甲基、总和特征3(Cω7c和/或Cω6c)以及总和特征8(Cω7c和/或Cω6c)。主要类异戊二烯醌为泛醌-10。极性脂质为双磷脂酰甘油(DPG)、磷脂酰乙醇胺(PE)、磷脂酰甘油(PG)、鞘糖脂(SGL)、磷脂酰肌醇甘露糖苷(PIM)以及一种未鉴定的糖脂(GL)。DNA G + C含量为67.1%。HHU CXW与鞘氨醇单胞菌属密切相关成员之间的平均核苷酸同一性(ANI)值和数字DNA-DNA杂交(dDDH)均低于物种划分的临界水平(分别为95-96%和70%)。基于表型、系统发育和化学分类学特征,HHU CXW代表鞘氨醇单胞菌属的一个新物种,为此提出名为人类鞘氨醇单胞菌(Sphingomonas hominis sp. nov.)。模式菌株为HHU CXW(= KCTC 72946 = CGMCC 1.17504 = MCCC 1K04223)。