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从电子废物回收场中分离到的产孢子漆酶、能降解双酚 A 的芽孢杆菌 GZB 的基因组序列揭示了双酚 A 降解途径的见解。

Genome sequence of a spore-laccase forming, BPA-degrading Bacillus sp. GZB isolated from an electronic-waste recycling site reveals insights into BPA degradation pathways.

机构信息

State Key Laboratory of Organic Geochemistry, Guangzhou Institute of Geochemistry, Chinese Academy of Sciences, Guangzhou, 510640, China.

Guangzhou Key Laboratory Environmental Catalysis and Pollution Control, Guangdong Key Laboratory of Environmental Catalysis and Health Risk Control, School of Environmental Science and Engineering, Institute of Environmental Health and Pollution Control, Guangdong University of Technology, Guangzhou, 510006, China.

出版信息

Arch Microbiol. 2019 Jul;201(5):623-638. doi: 10.1007/s00203-019-01622-2. Epub 2019 Feb 12.

Abstract

Bisphenol A (BPA) is a synthetic chemical with known deleterious effects on biota. A genome sequencing project is an important starting point for designing a suitable BPA bioremediation process, because it provides valuable genomic information about the physiological, metabolic, and genetic potential of the microbes used for the treatment. This study explored genomic insights provided by the BPA-degrading strain Bacillus sp. GZB, previously isolated from electronic-waste-dismantling site. The GZB genome is a circular chromosome, comprised of a total of 4,077,007 bp with G+C content comprising 46.2%. Genome contained 23 contigs encoded by 3881 protein-coding genes with nine rRNA and 53 tRNA genes. A comparative study demonstrated that strain GZB bloomed with some potential features as compared to other Bacillus species. In addition, strain GZB developed spore cells and displayed laccase activity while growing at elevated stress levels. Most importantly, strain GZB contained many protein-coding genes associated with BPA degradation, as well as the degradation of several other compounds. The protein-coding genes in the genome revealed the genetic mechanisms associated with the BPA degradation by strain GZB. This study predicts four possible degradation pathways for BPA, contributing to the possible use of strain GZB to remediate different polluted environments in the future.

摘要

双酚 A (BPA) 是一种具有已知生物毒性的合成化学物质。基因组测序项目是设计合适的 BPA 生物修复工艺的重要起点,因为它提供了有关用于处理的微生物的生理、代谢和遗传潜力的有价值的基因组信息。本研究探索了先前从电子废物拆解现场分离出的 BPA 降解菌株 Bacillus sp. GZB 提供的基因组见解。GZB 基因组是一个圆形染色体,由总共 4,077,007 bp 的碱基组成,G+C 含量为 46.2%。基因组包含 23 个由 3881 个蛋白编码基因编码的连续体,其中有 9 个 rRNA 和 53 个 tRNA 基因。比较研究表明,与其他芽孢杆菌属物种相比,菌株 GZB 具有一些潜在的特征。此外,菌株 GZB 在升高的应激水平下生长时会形成孢子细胞并显示漆酶活性。最重要的是,菌株 GZB 含有许多与 BPA 降解以及其他几种化合物降解相关的蛋白编码基因。基因组中的蛋白编码基因揭示了与 GZB 菌株 BPA 降解相关的遗传机制。本研究预测了 BPA 的四种可能降解途径,这有助于未来可能利用 GZB 菌株来修复不同的污染环境。

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