• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

脂质头部荷电和酰基链组成调节细菌β-桶通道的关闭。

Lipid Headgroup Charge and Acyl Chain Composition Modulate Closure of Bacterial β-Barrel Channels.

机构信息

Laboratory of Molecular Biophysics, Department of Physics, Universitat Jaume I, 12071 Castellón, Spain.

Section on Molecular Transport, Eunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, MD 20892, USA.

出版信息

Int J Mol Sci. 2019 Feb 5;20(3):674. doi: 10.3390/ijms20030674.

DOI:10.3390/ijms20030674
PMID:30764475
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6386941/
Abstract

The outer membrane of Gram-negative bacteria contains β-barrel proteins that form high-conducting ion channels providing a path for hydrophilic molecules, including antibiotics. Traditionally, these proteins have been considered to exist only in an open state so that regulation of outer membrane permeability was accomplished via protein expression. However, electrophysiological recordings show that β-barrel channels respond to transmembrane voltages by characteristically switching from a high-conducting, open state, to a so-called 'closed' state, with reduced permeability and possibly exclusion of large metabolites. Here, we use the bacterial porin OmpF from as a model system to gain insight on the control of outer membrane permeability by bacterial porins through the modulation of their open state. Using planar bilayer electrophysiology, we perform an extensive study of the role of membrane lipids in the OmpF channel closure by voltage. We pay attention not only to the effects of charges in the hydrophilic lipid heads but also to the contribution of the hydrophobic tails in the lipid-protein interactions. Our results show that gating kinetics is governed by lipid characteristics so that each stage of a sequential closure is different from the previous one, probably because of intra- or intermonomeric rearrangements.

摘要

革兰氏阴性细菌的外膜含有β-桶状蛋白,这些蛋白形成高导电性的离子通道,为亲水分子(包括抗生素)提供了通道。传统上,这些蛋白质被认为只存在于开放状态,因此通过蛋白质表达来调节外膜通透性。然而,电生理记录显示,β-桶状通道会对跨膜电压做出反应,特征是从高导电性的开放状态切换到所谓的“关闭”状态,通透性降低,可能会排斥大的代谢物。在这里,我们使用来自 的细菌孔蛋白 OmpF 作为模型系统,通过调节其开放状态,深入了解细菌孔蛋白对外膜通透性的控制。我们使用平面双层电生理学,对电压调节 OmpF 通道关闭过程中膜脂的作用进行了广泛的研究。我们不仅关注亲水头的电荷效应,还关注疏水尾在脂-蛋白相互作用中的贡献。我们的结果表明,门控动力学受脂质特性的控制,因此连续关闭的每个阶段都与前一个阶段不同,这可能是由于单体内部或单体间的重排。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a2a5/6386941/6564bc8d4055/ijms-20-00674-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a2a5/6386941/13e6e7aa6ba7/ijms-20-00674-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a2a5/6386941/c6812f9b7965/ijms-20-00674-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a2a5/6386941/97de98ee07fb/ijms-20-00674-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a2a5/6386941/dfe3e9298034/ijms-20-00674-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a2a5/6386941/6564bc8d4055/ijms-20-00674-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a2a5/6386941/13e6e7aa6ba7/ijms-20-00674-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a2a5/6386941/c6812f9b7965/ijms-20-00674-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a2a5/6386941/97de98ee07fb/ijms-20-00674-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a2a5/6386941/dfe3e9298034/ijms-20-00674-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a2a5/6386941/6564bc8d4055/ijms-20-00674-g005.jpg

相似文献

1
Lipid Headgroup Charge and Acyl Chain Composition Modulate Closure of Bacterial β-Barrel Channels.脂质头部荷电和酰基链组成调节细菌β-桶通道的关闭。
Int J Mol Sci. 2019 Feb 5;20(3):674. doi: 10.3390/ijms20030674.
2
Lipid binding attenuates channel closure of the outer membrane protein OmpF.脂质结合减弱了外膜蛋白 OmpF 的通道关闭。
Proc Natl Acad Sci U S A. 2018 Jun 26;115(26):6691-6696. doi: 10.1073/pnas.1721152115. Epub 2018 Jun 11.
3
Folding kinetics of the outer membrane proteins OmpA and FomA into phospholipid bilayers.外膜蛋白OmpA和FomA折叠进入磷脂双分子层的动力学。
Chem Phys Lipids. 2006 Jun;141(1-2):30-47. doi: 10.1016/j.chemphyslip.2006.02.004. Epub 2006 Mar 20.
4
Voltage gating is a fundamental feature of porin and toxin beta-barrel membrane channels.电压门控是孔蛋白和毒素β桶状膜通道的一个基本特征。
FEBS Lett. 1998 Jul 24;431(3):305-8. doi: 10.1016/s0014-5793(98)00761-3.
5
Determining the Orientation of Porins in Planar Lipid Bilayers.测定平面脂双层中孔蛋白的取向。
Methods Mol Biol. 2021;2186:51-62. doi: 10.1007/978-1-0716-0806-7_5.
6
Selectivity in lipid binding to the bacterial outer membrane protein OmpF.脂质与细菌外膜蛋白OmpF结合的选择性。
Biophys J. 2000 Oct;79(4):2066-74. doi: 10.1016/S0006-3495(00)76454-X.
7
Aggregation and porin-like channel activity of a beta sheet peptide.一种β折叠肽的聚集及孔蛋白样通道活性
Biochemistry. 2005 Aug 2;44(30):10259-70. doi: 10.1021/bi0508643.
8
Role of the constriction loop in the gating of outer membrane porin PhoE of Escherichia coli.收缩环在大肠杆菌外膜孔蛋白PhoE门控中的作用。
FEBS Lett. 1997 Oct 6;415(3):317-20. doi: 10.1016/s0014-5793(97)01150-2.
9
Rapid screening of membrane protein activity: electrophysiological analysis of OmpF reconstituted in proteoliposomes.膜蛋白活性的快速筛选:重组于蛋白脂质体中的OmpF的电生理分析
Lab Chip. 2008 Apr;8(4):587-95. doi: 10.1039/b713982a. Epub 2008 Feb 15.
10
E.coli PhoE porin has an opposite voltage-dependence to the homologous OmpF.大肠杆菌PhoE孔蛋白与同源的OmpF具有相反的电压依赖性。
EMBO J. 1998 Jan 2;17(1):93-100. doi: 10.1093/emboj/17.1.93.

引用本文的文献

1
Supralinear scaling behavior of ionic transport in membrane nanochannels regulated by outer-surface charges.外表面电荷调控的膜纳米通道中离子传输的超线性缩放行为。
Nanoscale Adv. 2024 Oct 14;6(24):6344-57. doi: 10.1039/d4na00540f.
2
Beta-Barrel Channel Response to High Electric Fields: Functional Gating or Reversible Denaturation?β-桶通道对高电场的响应:功能门控还是可逆变性?
Int J Mol Sci. 2023 Nov 23;24(23):16655. doi: 10.3390/ijms242316655.
3
Gating of β-Barrel Protein Pores, Porins, and Channels: An Old Problem with New Facets.

本文引用的文献

1
Hydrophobic Mismatch Modulates Stability and Plasticity of Human Mitochondrial VDAC2.疏水性失配调节人线粒体 VDAC2 的稳定性和可塑性。
Biophys J. 2018 Dec 18;115(12):2386-2394. doi: 10.1016/j.bpj.2018.11.001. Epub 2018 Nov 7.
2
Scaling Behavior of Ionic Transport in Membrane Nanochannels.膜纳米通道中离子输运的标度行为。
Nano Lett. 2018 Oct 10;18(10):6604-6610. doi: 10.1021/acs.nanolett.8b03235. Epub 2018 Sep 10.
3
Lipid binding attenuates channel closure of the outer membrane protein OmpF.脂质结合减弱了外膜蛋白 OmpF 的通道关闭。
β-桶状蛋白孔道、孔蛋白和通道的门控:一个具有新方面的老问题。
Int J Mol Sci. 2023 Jul 28;24(15):12095. doi: 10.3390/ijms241512095.
4
The use of RNA-based treatments in the field of cancer immunotherapy.基于 RNA 的治疗方法在癌症免疫治疗领域的应用。
Mol Cancer. 2023 Jul 7;22(1):106. doi: 10.1186/s12943-023-01807-w.
5
The Single Residue K12 Governs the Exceptional Voltage Sensitivity of Mitochondrial Voltage-Dependent Anion Channel Gating.单一残基 K12 控制着线粒体电压依赖性阴离子通道门控的非凡电压敏感性。
J Am Chem Soc. 2022 Aug 17;144(32):14564-14577. doi: 10.1021/jacs.2c03316. Epub 2022 Aug 4.
6
Targeting the Multiple Physiologic Roles of VDAC With Steroids and Hydrophobic Drugs.用类固醇和疏水药物靶向电压依赖性阴离子通道的多种生理作用。
Front Physiol. 2020 May 7;11:446. doi: 10.3389/fphys.2020.00446. eCollection 2020.
Proc Natl Acad Sci U S A. 2018 Jun 26;115(26):6691-6696. doi: 10.1073/pnas.1721152115. Epub 2018 Jun 11.
4
Mechanism of OmpG pH-Dependent Gating from Loop Ensemble and Single Channel Studies.OmpG 环系及单通道研究中 pH 依赖门控的机制。
J Am Chem Soc. 2018 Jan 24;140(3):1105-1115. doi: 10.1021/jacs.7b11979. Epub 2018 Jan 11.
5
Ion Transport in Confined Geometries below the Nanoscale: Access Resistance Dominates Protein Channel Conductance in Diluted Solutions.纳米尺度以下受限几何中的离子传输:在稀释溶液中,欧姆接触电阻主导蛋白通道电导。
ACS Nano. 2017 Oct 24;11(10):10392-10400. doi: 10.1021/acsnano.7b05529. Epub 2017 Sep 22.
6
The mitochondrial VDAC of bean seeds recruits phosphatidylethanolamine lipids for its proper functioning.豆类种子的线粒体 VDAC 通过募集磷脂酰乙醇胺脂质来保证其正常运作。
Biochim Biophys Acta Bioenerg. 2017 Sep;1858(9):786-794. doi: 10.1016/j.bbabio.2017.06.005. Epub 2017 Jun 27.
7
Lipid perturbation by membrane proteins and the lipophobic effect.膜蛋白引起的脂质扰动和疏脂效应。
Biochim Biophys Acta Biomembr. 2017 Jan;1859(1):126-134. doi: 10.1016/j.bbamem.2016.10.014. Epub 2016 Oct 26.
8
Lipid Regulation of Sodium Channels.钠离子通道的脂质调节。
Curr Top Membr. 2016;78:353-407. doi: 10.1016/bs.ctm.2016.04.003. Epub 2016 May 24.
9
Conductance hysteresis in the voltage-dependent anion channel.电压依赖性阴离子通道中的电导滞后现象。
Eur Biophys J. 2015 Sep;44(6):465-472. doi: 10.1007/s00249-015-1049-2. Epub 2015 Jun 21.
10
Dynamic memory of a single voltage-gated potassium ion channel: A stochastic nonequilibrium thermodynamic analysis.单个电压门控钾离子通道的动态记忆:随机非平衡热力学分析。
J Chem Phys. 2015 May 14;142(18):185101. doi: 10.1063/1.4920937.