Zhu Yao, Mullen Anne Maria, Rai Dilip K, Kelly Alan L, Sheehan David, Cafferky Jamie, Hamill Ruth M
Teagasc Food Research Centre, Ashtown, Dublin D15KN3K, Ireland.
School of Food and Nutritional Sciences, University College Cork, Cork T12 K8AF, Ireland.
Foods. 2019 Feb 5;8(2):60. doi: 10.3390/foods8020060.
RNAlater is regarded as a potential preservation method for proteins, while its effect on bovine muscle proteins has rarely been evaluated. Bovine muscle protein samples ( = 12) collected from three tender (Warner⁻Bratzler shear force: 30.02⁻31.74 N) and three tough (Warner⁻Bratzler shear force: 54.12⁻66.25 N) Longissimus thoracis et lumborum (LTL) samples, preserved using two different sampling preservation methods (RNAlater and dry ice), at two time points (day 0 and day 14), were characterized using one-dimensional electrophoresis. Fourteen bands with molecular weights ranging from 15 to 250 kDa were verified, both in the dry ice and RNAlater storage groups, at each time point, using image analysis. A shift from high to low molecular weight fragments, between day 0 and day 14, indicated proteolysis of the muscle proteins during post mortem storage. Liquid chromatography-tandem mass spectrometry (LC-MS/MS) analyses and database searching resulted in the identification of 10 proteins in four bands. Protein profiles of muscle preserved in RNAlater were similar to those of muscle frozen on dry ice storage, both at day 0 and day 14. The results demonstrate that RNAlater could be a simple and efficient way to preserve bovine muscle proteins for bovine muscle proteomic studies.
RNA 延缓剂被视为一种潜在的蛋白质保存方法,但其对牛肌肉蛋白质的影响鲜有评估。从三块嫩度不同(Warner-Bratzler剪切力:30.02 - 31.74 N)和三块韧性不同(Warner-Bratzler剪切力:54.12 - 66.25 N)的胸腰段最长肌(LTL)样本中采集牛肌肉蛋白质样本(n = 12),使用两种不同的采样保存方法(RNA 延缓剂和干冰)在两个时间点(第0天和第14天)进行保存,然后通过一维电泳对其进行表征。在每个时间点,利用图像分析技术,在干冰和RNA延缓剂储存组中均验证了14条分子量范围在15至250 kDa之间的条带。在第0天和第14天之间,从高分子量片段向低分子量片段的转变表明宰后储存期间肌肉蛋白质发生了蛋白水解。液相色谱-串联质谱(LC-MS/MS)分析和数据库检索结果鉴定出四条条带中的10种蛋白质。在第0天和第14天,用RNA延缓剂保存的肌肉蛋白质谱与用干冰冷冻保存的肌肉蛋白质谱相似。结果表明,对于牛肌肉蛋白质组学研究而言,RNA延缓剂可能是一种简单有效的保存牛肌肉蛋白质的方法。