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短毛兔和长毛兔皮肤组织学和转录组差异分析。

Analyses of histological and transcriptome differences in the skin of short-hair and long-hair rabbits.

机构信息

Anhui Key Laboratory of Livestock and Poultry Product Safety Engineering, Institute of Animal Husbandry and Veterinary Medicine, Anhui Academy of Agricultural Sciences, Hefei, 230031, Anhui, People's Republic of China.

出版信息

BMC Genomics. 2019 Feb 15;20(1):140. doi: 10.1186/s12864-019-5503-x.

Abstract

BACKGROUND

Hair fibre length is an important economic trait of rabbits in fur production. However, molecular mechanisms regulating rabbit hair growth have remained elusive.

RESULTS

Here we aimed to characterise the skin traits and gene expression profiles of short-hair and long-hair rabbits by histological and transcriptome analyses. Haematoxylin-eosin staining was performed to observe the histological structure of the skin of short-hair and long-hair rabbits. Compared to that in short-hair rabbits, a significantly longer anagen phase was observed in long-hair rabbits. In addition, by RNA sequencing, we identified 951 genes that were expressed at significantly different levels in the skin of short-hair and long-hair rabbits. Nine significantly differentially expressed genes were validated by quantitative real-time polymerase chain reaction. A gene ontology analysis revealed that epidermis development, hair follicle development, and lipid metabolic process were significantly enriched. Further, we identified potential functional genes regulating follicle development, lipid metabolic, and apoptosis as well as important pathways including extracellular matrix-receptor interaction and basal cell carcinoma pathway.

CONCLUSIONS

The present study provides transcriptome evidence for the differences in hair growth between short-hair and long-hair rabbits and reveals that lipid metabolism and apoptosis might constitute major factors contributing to hair length.

摘要

背景

毛发纤维长度是兔毛生产中一个重要的经济性状。然而,调控兔毛生长的分子机制仍不清楚。

结果

本研究通过组织学和转录组分析,旨在描述短毛兔和长毛兔的皮肤特征和基因表达谱。通过苏木精-伊红染色观察短毛兔和长毛兔皮肤的组织学结构。与短毛兔相比,长毛兔的生长期明显更长。此外,通过 RNA 测序,我们在短毛兔和长毛兔的皮肤中鉴定出 951 个表达水平差异显著的基因。通过定量实时聚合酶链反应验证了 9 个差异表达基因。基因本体分析表明,表皮发育、毛囊发育和脂质代谢过程显著富集。此外,我们鉴定出了潜在的调控毛囊发育、脂质代谢和细胞凋亡的功能基因,以及细胞外基质-受体相互作用和基底细胞癌途径等重要途径。

结论

本研究为短毛兔和长毛兔生长差异提供了转录组证据,并表明脂质代谢和细胞凋亡可能是导致毛长差异的主要因素。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f967/6377753/14730d1d5b2c/12864_2019_5503_Fig1_HTML.jpg

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