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共生藻 Symbiodinium microadriaticum 对标准藻类转化方法的遗传难治性。

The genetic intractability of Symbiodinium microadriaticum to standard algal transformation methods.

机构信息

Red Sea Research Center, King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia.

Department of Biological Sciences, Sunway University, Bandar Sunway, Malaysia.

出版信息

PLoS One. 2019 Feb 19;14(2):e0211936. doi: 10.1371/journal.pone.0211936. eCollection 2019.

DOI:10.1371/journal.pone.0211936
PMID:30779749
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6380556/
Abstract

Modern transformation and genome editing techniques have shown great success across a broad variety of organisms. However, no study of successfully applied genome editing has been reported in a dinoflagellate despite the first genetic transformation of Symbiodinium being published about 20 years ago. Using an array of different available transformation techniques, we attempted to transform Symbiodinium microadriaticum (CCMP2467), a dinoflagellate symbiont of reef-building corals, with the view to performing subsequent CRISPR-Cas9 mediated genome editing. Plasmid vectors designed for nuclear transformation containing the chloramphenicol resistance gene under the control of the CaMV p35S promoter as well as several putative endogenous promoters were used to test a variety of transformation techniques including biolistics, electroporation and agitation with silicon carbide whiskers. Chloroplast-targeted transformation was attempted using an engineered Symbiodinium chloroplast minicircle encoding a modified PsbA protein expected to confer atrazine resistance. We report that we have been unable to confer chloramphenicol or atrazine resistance on Symbiodinium microadriaticum strain CCMP2467.

摘要

现代转化和基因组编辑技术在广泛的生物中取得了巨大的成功。然而,尽管大约 20 年前发表了第一个共生藻属(Symbiodinium)的遗传转化研究,但在甲藻中还没有成功应用基因组编辑的报道。我们使用了一系列不同的可利用的转化技术,试图对造礁石珊瑚的共生甲藻——微小根管藻(Symbiodinium microadriaticum,CCMP2467)进行转化,以期进行后续的 CRISPR-Cas9 介导的基因组编辑。设计了用于核转化的质粒载体,其中包含氯霉素抗性基因,由 CaMV p35S 启动子控制,以及几个假定的内源性启动子,用于测试各种转化技术,包括生物弹射击、电穿孔和碳化硅晶须搅拌。使用一种工程化的 Symbiodinium 叶绿体微环,该微环编码一种经修饰的 PsbA 蛋白,预计能赋予草甘膦抗性,尝试了叶绿体靶向转化。我们报告说,我们未能赋予微小根管藻(Symbiodinium microadriaticum)CCMP2467 菌株氯霉素或草甘膦抗性。

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本文引用的文献

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2
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ISME J. 2018 Feb;12(2):639-643. doi: 10.1038/ismej.2017.179. Epub 2017 Oct 20.
3
Global warming and recurrent mass bleaching of corals.全球变暖与珊瑚的反复大规模白化。
高盐度下高水平的弗洛里多苷将刺胞动物-藻类内共生体中的渗透适应与白化易感性联系起来。
Biol Open. 2019 Dec 16;8(12):bio045591. doi: 10.1242/bio.045591.
4
Genetic transformation of the dinoflagellate chloroplast.甲藻叶绿体的遗传转化。
Elife. 2019 Jul 18;8:e45292. doi: 10.7554/eLife.45292.
Nature. 2017 Mar 15;543(7645):373-377. doi: 10.1038/nature21707.
4
Genome-wide mapping of 5-hydroxymethyluracil in the eukaryote parasite Leishmania.真核寄生虫利什曼原虫中5-羟甲基尿嘧啶的全基因组图谱分析。
Genome Biol. 2017 Jan 30;18(1):23. doi: 10.1186/s13059-017-1150-1.
5
Expanding the Symbiodinium (Dinophyceae, Suessiales) Toolkit Through Protoplast Technology.通过原生质体技术扩展共生藻(甲藻纲,苏伊斯藻目)工具包
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