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Glanzmann血小板无力症患者靶向测序的分子产量

Molecular yield of targeted sequencing for Glanzmann thrombasthenia patients.

作者信息

Owaidah Tarek, Saleh Mahasen, Baz Batoul, Abdulaziz Basma, Alzahrani Hazza, Tarawah Ahmed, Almusa Abdulrahman, AlNounou Randa, AbaAlkhail Hala, Al-Numair Nouf, Altahan Rahaf, Abouelhoda Mohammed, Alamoudi Thamer, Monies Dorota, Jabaan Amjad, Al Tassan Nada

机构信息

1Department of Pathology and Laboratory Medicine, King Faisal Specialist Hospital and Research Centre, Riyadh, Saudi Arabia.

2Saudi Human Genome Program, King Abdulaziz City for Science and Technology, Riyadh, Saudi Arabia.

出版信息

NPJ Genom Med. 2019 Feb 14;4:4. doi: 10.1038/s41525-019-0079-6. eCollection 2019.

Abstract

Glanzmann thrombasthenia (GT) is a rare autosomal recessive bleeding disorder. Around 490 mutations in and genes were reported. We aimed to use targeted next-generation sequencing (NGS) to identify variants in patients with GT. We screened 72 individuals (including unaffected family members) using a panel of 393 genes (SHGP heme panel). Validation was done by Sanger sequencing and pathogenicity was predicted using multiple tools. In 83.5% of our cohort, 17 mutations were identified in and (including 6 that were not previously reported). In addition to variants in the two known genes, we found variants in , and . The SHGP heme panel can be used as a high-throughput molecular diagnostic assay to screen for mutations and variants in GT cases and carriers. Our findings expand the molecular landscape of GT and emphasize the robustness and usefulness of this panel.

摘要

血小板无力症(GT)是一种罕见的常染色体隐性出血性疾病。据报道,α和β基因存在约490种突变。我们旨在使用靶向新一代测序(NGS)来鉴定GT患者的变异。我们使用一组393个基因(SHGP血红素组)对72名个体(包括未受影响的家庭成员)进行了筛查。通过桑格测序进行验证,并使用多种工具预测致病性。在我们队列的83.5%中,在α和β基因中鉴定出17种突变(包括6种先前未报道的突变)。除了两个已知基因中的变异外,我们还在其他基因中发现了变异。SHGP血红素组可作为一种高通量分子诊断检测方法,用于筛查GT病例和携带者中的突变和变异。我们的研究结果扩展了GT的分子图谱,并强调了该检测组的稳健性和实用性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/562a/6375963/982e1a3ed57f/41525_2019_79_Fig1_HTML.jpg

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