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特征微小 RNA 表达谱与非洲绿猴的脂质代谢有关。

Signature MicroRNA expression profile is associated with lipid metabolism in African green monkey.

机构信息

Laboratory Animal Center, the Academy of Military Medical Sciences, Beijing, 100071, People's Republic of China.

出版信息

Lipids Health Dis. 2019 Feb 28;18(1):55. doi: 10.1186/s12944-019-0999-2.

Abstract

BACKGROUND

Non-human primates (NHPs) are important models of medical research on obesity and cardiovascular diseases. As two of the most commonly used NHPs, cynomolgus macaque (CM) and African green monkey (AGM) own different capacities in lipid metabolism of which the mechanism is unknown. This study investigated the expression profiles of lipid metabolism-related microRNAs (miRNAs) in CM and AGM and their possible roles in controlling lipid metabolism-related gene expression.

METHODS

By small RNA deep sequencing, the plasma miRNA expression patterns of CM and AGM were compared. The lipid metabolism-related miRNAs were validated through quantitative reverse-transcription (RT) polymerase chain reaction (PCR). Related-target genes were predicted by TargetScan and validated in Vero cells.

RESULTS

Compared to CM, 85 miRNAs were upregulated with over 1.5-fold change in AGM of which 12 miRNAs were related to lipid metabolism. miR-122, miR-9, miR-185, miR-182 exhibited the greatest fold changes(fold changes are 51.2, 3.8, 3.7, 3.3 respectively; all P < 0.01). And 77 miRNAs were downregulated with over 1.5-fold change in AGM of which 3, miR-370, miR-26, miR-128 (fold changes are 9.3, 1.8, 1.7 respectively; all P < 0.05) were related to lipid metabolism. The lipid metabolism-related gene targets were predicted by TargetScan and confirmed in the Vero cells.

CONCLUSION

We report for the first time a circulating lipid metabolism-related miRNA profile for CM and AGM, which may add to knowledge of differences between these two non-human primate species and miRNAs' roles in lipid metabolism.

摘要

背景

非人类灵长类动物(NHPs)是肥胖和心血管疾病医学研究的重要模型。作为两种最常用的 NHP 之一,食蟹猴(CM)和绿猴(AGM)在脂质代谢方面具有不同的能力,其机制尚不清楚。本研究旨在研究 CM 和 AGM 中与脂质代谢相关的 microRNA(miRNA)的表达谱及其在控制脂质代谢相关基因表达中的可能作用。

方法

通过小 RNA 深度测序比较 CM 和 AGM 的血浆 miRNA 表达谱。通过定量逆转录(RT)聚合酶链反应(PCR)验证与脂质代谢相关的 miRNA。通过 TargetScan 预测相关靶基因,并在 Vero 细胞中验证。

结果

与 CM 相比,AGM 中有 85 个 miRNA 上调,上调倍数超过 1.5 倍,其中 12 个 miRNA 与脂质代谢有关。miR-122、miR-9、miR-185、miR-182 的变化倍数最大(变化倍数分别为 51.2、3.8、3.7、3.3;均 P<0.01)。AGM 中有 77 个 miRNA 下调,下调倍数超过 1.5 倍,其中 3 个 miRNA(miR-370、miR-26、miR-128)与脂质代谢有关(变化倍数分别为 9.3、1.8、1.7;均 P<0.05)。通过 TargetScan 预测了脂质代谢相关基因靶标,并在 Vero 细胞中得到了验证。

结论

本研究首次报道了 CM 和 AGM 循环脂质代谢相关 miRNA 谱,这可能有助于了解这两种非人类灵长类动物之间的差异以及 miRNA 在脂质代谢中的作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c618/6396449/19c16e779578/12944_2019_999_Fig1_HTML.jpg

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