Scott Phillip M, Erickson Katelyn M, Troutman Jerry M
Biochemistry. 2019 Apr 2;58(13):1818-1830. doi: 10.1021/acs.biochem.9b00040. Epub 2019 Mar 12.
When subjected to harsh conditions such as low pH, pathogenic Escherichia coli can secrete colanic acid to establish a protective barrier between the organism and the acidic environment. The colanic acid consists of a six-sugar repeating unit polymer comprised of glucose, fucose, galactose, and glucuronic acid. The region of the E. coli genome that encodes colanic acid biosynthesis has been reported, and the first enzyme in the biosynthesis pathway has been biochemically characterized. However, the specific roles of the remaining genes required for colanic acid biosynthesis have not been identified. Here we report the in vitro reconstitution of the next six steps in the assembly of the colanic acid repeating unit. To do this, we have cloned and overexpressed each gene within the colanic acid biosynthesis operon. We then tested the activity of the protein product of these genes using high-performance liquid chromatography analysis and a fluorescent analogue of the isoprenoid anchor bactoprenyl diphospho-glucose as a starting substrate. To ensure that retention time changes were associated with varying sugar additions or modifications, we developed a liquid chromatography-mass spectrometry method for analysis of the products produced by each enzyme. We have identified the function of all but one encoded glycosyltransferase and have identified the function of two acetyltransferases. This work demonstrates the centrality of acetylation in the biosynthesis of colanic acid and provides insight into the activity of key proteins involved in the production of an important and highly conserved bacterial glycopolymer.
当受到低pH等恶劣条件影响时,致病性大肠杆菌会分泌结肠酸,在菌体与酸性环境之间建立起一道保护屏障。结肠酸由一个由葡萄糖、岩藻糖、半乳糖和葡萄糖醛酸组成的六糖重复单元聚合物构成。大肠杆菌基因组中编码结肠酸生物合成的区域已被报道,且生物合成途径中的首个酶已得到生化特性鉴定。然而,结肠酸生物合成所需的其余基因的具体作用尚未明确。在此,我们报道了结肠酸重复单元组装过程中接下来六个步骤的体外重构。为此,我们克隆并过量表达了结肠酸生物合成操纵子内的每个基因。然后,我们使用高效液相色谱分析以及以类异戊二烯锚定物细菌萜醇二磷酸葡萄糖的荧光类似物作为起始底物,测试了这些基因的蛋白质产物的活性。为确保保留时间的变化与糖的添加或修饰的变化相关,我们开发了一种液相色谱 - 质谱方法来分析每种酶产生的产物。我们已确定了除一个编码糖基转移酶外的所有酶的功能,并确定了两个乙酰转移酶的功能。这项工作证明了乙酰化在结肠酸生物合成中的核心地位,并为参与一种重要且高度保守的细菌糖聚合物产生的关键蛋白质的活性提供了深入见解。