Department of Microbiology and Immunology, University of Arkansas for Medical Sciences, 4301 West Markham Street, Little Rock, Arkansas 72205, United States.
Biochemistry. 2021 Jul 13;60(27):2221-2230. doi: 10.1021/acs.biochem.1c00314. Epub 2021 Jun 23.
Colanic acid is a glycopolymer loosely associated with the outer membrane of that plays a role in pathogen survival. For nearly six decades since its discovery, the functional identities of the enzymes necessary to synthesize colanic acid have yet to be assessed in full. Herein, we developed a method for detecting the lipid-linked intermediates from each step of colanic acid biosynthesis in . The accumulation of each enzyme product was made possible by inactivating sequential genes involved in colanic acid biosynthesis and upregulating the colanic acid operon by inducing transcription. LC-MS analysis revealed that these accumulated materials were consistent with the well-documented composition analysis. Recapitulating the native bioassembly of colanic acid enabled us to identify the functional roles of the last two enzymes, WcaL and WcaK, associated with the formation of the lipid-linked oligosaccharide repeating unit of colanic acid. Importantly, biochemical evidence is provided for the formation of the final glycosylation hexasaccharide product formed by WcaL and the addition of a pyruvate moiety to form a pyruvylated hexasaccharide by WcaK. These findings provide insight into the development of methods for the identification of enzyme functions during cell envelope synthesis.
短梗霉酸是一种与 的外膜松散结合的糖聚合物,在病原体存活中发挥作用。自发现以来的近六十年中,用于合成短梗霉酸的必需酶的功能特性尚未得到全面评估。在此,我们开发了一种在 中检测短梗霉酸生物合成每一步的脂键中间体的方法。通过失活参与短梗霉酸生物合成的顺序基因并通过诱导 转录来上调短梗霉酸操纵子,使得每种酶产物的积累成为可能。LC-MS 分析表明,这些积累的物质与文献中报道的组成分析一致。重现短梗霉酸的天然生物组装使我们能够确定与短梗霉酸脂键寡糖重复单元形成相关的最后两个酶(WcaL 和 WcaK)的功能作用。重要的是,提供了生化证据证明了由 WcaL 形成的最终糖基化六糖产物的形成以及由 WcaK 形成的丙酮酸部分的添加,形成了丙酮酸化的六糖。这些发现为鉴定细胞包膜合成过程中酶功能的方法的发展提供了新的思路。