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散发性梅尼埃病中听力损失基因的罕见错义变异过量。

Excess of Rare Missense Variants in Hearing Loss Genes in Sporadic Meniere Disease.

作者信息

Gallego-Martinez Alvaro, Requena Teresa, Roman-Naranjo Pablo, Lopez-Escamez Jose A

机构信息

Otology and Neurotology Group CTS 495, Department of Genomic Medicine, Centre for Genomics and Oncological Research (GENyO), Pfizer, University of Granada, Andalusian Regional Government, Granada, Spain.

Department of Otolaryngology, Instituto de Investigación Biosanitaria (ibs. GRANADA), Hospital Universitario Virgen de las Nieves, Universidad de Granada, Granada, Spain.

出版信息

Front Genet. 2019 Feb 15;10:76. doi: 10.3389/fgene.2019.00076. eCollection 2019.

Abstract

Meniere's disease (MD) is a clinical spectrum of rare disorders characterized by vertigo attacks, associated with sensorineural hearing loss (SNHL) and tinnitus involving low to medium frequencies. Although it shows familial aggregation with incomplete phenotypic forms and variable expressivity, most cases are considered sporadic. The aim of this study was to investigate the burden for rare variation in SNHL genes in patients with sporadic MD. We conducted a targeted-sequencing study including SNHL and familial MD genes in 890 MD patients to compare the frequency of rare variants in cases using three independent public datasets as controls. Patients with sporadic MD showed a significant enrichment of missense variants in SNHL genes that was not found in the controls. The list of genes includes , and . A rare synonymous variant with unknown significance was found in the gene in several unrelated patients with MD. There is a burden of rare variation in certain SNHL genes in sporadic MD. Furthermore, the interaction of common and rare variants in SNHL genes may have an additive effect on MD phenotype. This study will contribute to design a gene panel for the genetic diagnosis of MD.

摘要

梅尼埃病(MD)是一种罕见疾病的临床谱,其特征为眩晕发作,伴有感音神经性听力损失(SNHL)和涉及低频至中频的耳鸣。尽管它表现出家族聚集性,具有不完全的表型形式和可变的表达性,但大多数病例被认为是散发性的。本研究的目的是调查散发性MD患者中SNHL基因罕见变异的负担。我们对890例MD患者进行了一项靶向测序研究,包括SNHL和家族性MD基因,以使用三个独立的公共数据集作为对照来比较病例中罕见变异的频率。散发性MD患者在SNHL基因中显示出错义变异的显著富集,而在对照中未发现。基因列表包括 、 和 。在几个无关的MD患者中,在 基因中发现了一个意义不明的罕见同义变异。散发性MD中某些SNHL基因存在罕见变异的负担。此外,SNHL基因中常见和罕见变异的相互作用可能对MD表型具有累加效应。本研究将有助于设计用于MD基因诊断的基因panel。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/19bd/6385525/0143dad4abef/fgene-10-00076-g0001.jpg

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