饲料效率不同的猪肝脏的RNA测序揭示了大量营养素代谢、肝脏生长和免疫反应的变化。
RNA-Seq of Liver From Pigs Divergent in Feed Efficiency Highlights Shifts in Macronutrient Metabolism, Hepatic Growth and Immune Response.
作者信息
Horodyska Justyna, Hamill Ruth M, Reyer Henry, Trakooljul Nares, Lawlor Peadar G, McCormack Ursula M, Wimmers Klaus
机构信息
Teagasc, Food Research Centre, Ashtown, Ireland.
Leibniz Institute for Farm Animal Biology (FBN), Institute for Genome Biology, Dummerstorf, Germany.
出版信息
Front Genet. 2019 Feb 19;10:117. doi: 10.3389/fgene.2019.00117. eCollection 2019.
Liver is a metabolically complex organ that influences nutrient partitioning and potentially modulates the efficiency of converting energy acquired from macronutrients ingestion into a muscle and/or adipose tissue (referred to as feed efficiency, FE). The objective of this study was to sequence the hepatic tissue transcriptome of closely related but differently feed efficient pigs ( = 16) and identify relevant biological processes that underpin the differences in liver phenotype between FE groups. Liver weight did not significantly differ between the FE groups, however, blood parameters showed that total protein, glucose, cholesterol and percentage of lymphocytes were significantly greater in high-FE pigs. Ontology analysis revealed carbohydrate, lipid and protein metabolism to be significantly enriched with differentially expressed genes. In particular, high-FE pigs exhibited gene expression patterns suggesting improved absorption of carbohydrates and cholesterol as well as enhanced reverse cholesterol transport. Furthermore, the inferred decrease in bile acid synthesis in high-FE pigs may contribute to the observed greater levels of serum glucose, which can be then delivered to cells and utilized for growth and maintenance. Gene ontology analysis also suggested that livers of more efficient pigs may be characterized by higher protein turnover and increased epithelial cell differentiation, whereby an enhanced quantity of invariant natural killer T-cells and viability of natural killer cells could induce a quicker and more effective hepatic response to inflammatory stimuli. Our findings suggest that this prompt hepatic response to inflammation in high-FE group may contribute to the more efficient utilization of nutrients for growth in these animals.
肝脏是一个代谢复杂的器官,它影响营养物质的分配,并可能调节将从摄入的大量营养素中获取的能量转化为肌肉和/或脂肪组织的效率(称为饲料效率,FE)。本研究的目的是对亲缘关系密切但饲料效率不同的猪(n = 16)的肝脏组织转录组进行测序,并确定FE组之间肝脏表型差异背后的相关生物学过程。FE组之间的肝脏重量没有显著差异,然而,血液参数显示,高FE猪的总蛋白、葡萄糖、胆固醇和淋巴细胞百分比显著更高。本体分析表明,碳水化合物、脂质和蛋白质代谢中差异表达基因显著富集。特别是,高FE猪表现出的基因表达模式表明碳水化合物和胆固醇的吸收改善以及逆向胆固醇转运增强。此外,高FE猪胆汁酸合成的推断减少可能导致观察到的血清葡萄糖水平升高,然后血清葡萄糖可以输送到细胞并用于生长和维持。基因本体分析还表明,效率更高的猪的肝脏可能具有更高的蛋白质周转率和上皮细胞分化增加的特征,由此数量增加的不变自然杀伤T细胞和自然杀伤细胞的活力可以诱导肝脏对炎症刺激做出更快、更有效的反应。我们的研究结果表明,高FE组肝脏对炎症的这种快速反应可能有助于这些动物更有效地利用营养物质进行生长。