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H3K9me3 对于靶向新进化基因的独特亚群的小 RNA 的遗传是必需的。

H3K9me3 is required for inheritance of small RNAs that target a unique subset of newly evolved genes.

机构信息

Department of Neurobiology, Wise Faculty of Life Sciences & Sagol School of Neuroscience, Tel Aviv University, Tel Aviv, Israel.

出版信息

Elife. 2019 Mar 14;8:e40448. doi: 10.7554/eLife.40448.

DOI:10.7554/eLife.40448
PMID:30869075
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6417860/
Abstract

UNLABELLED

In , RNA interference (RNAi) responses can transmit across generations via small RNAs. RNAi inheritance is associated with Histone-3-Lysine-9 tri-methylation (H3K9me3) of the targeted genes. In other organisms, maintenance of silencing requires a feed-forward loop between H3K9me3 and small RNAs. Here, we show that in not only is H3K9me3 unnecessary for inheritance, the modification's function depends on the identity of the RNAi-targeted gene. We found an asymmetry in the requirement for H3K9me3 and the main worm H3K9me3 methyltransferases, SET-25 and SET-32. Both methyltransferases promote heritable silencing of the foreign gene , but are dispensable for silencing of the endogenous gene . Genome-wide examination of heritable endogenous small interfering RNAs (endo-siRNAs) revealed that endo-siRNAs that depend on SET-25 and SET-32 target newly acquired and highly H3K9me3 marked genes. Thus, 'repressive' chromatin marks could be important specifically for heritable silencing of genes which are flagged as 'foreign', such as .

EDITORIAL NOTE

This article has been through an editorial process in which the authors decide how to respond to the issues raised during peer review. The Reviewing Editor's assessment is that all the issues have been addressed (see decision letter).

摘要

未标记

在中,RNA 干扰 (RNAi) 反应可以通过小 RNA 在代际间传递。RNAi 遗传与靶基因的组蛋白 3-赖氨酸-9 三甲基化 (H3K9me3) 有关。在其他生物中,沉默的维持需要 H3K9me3 和小 RNA 之间的前馈环。在这里,我们表明,在中,H3K9me3 的修饰不仅对遗传是不必要的,而且其功能取决于 RNAi 靶向基因的身份。我们发现 H3K9me3 和主要的蠕虫 H3K9me3 甲基转移酶 SET-25 和 SET-32 的需求存在不对称性。这两种甲基转移酶都促进外源基因的可遗传沉默,但对内源基因的沉默是可有可无的。对可遗传的内源性小干扰 RNA (endo-siRNA) 的全基因组检查表明,依赖 SET-25 和 SET-32 的 endo-siRNA 靶向新获得的和高度 H3K9me3 标记的基因。因此,“抑制性”染色质标记可能对被标记为“外来”的基因的可遗传沉默特别重要,例如。

编辑注释

本文经过编辑过程,作者决定如何处理同行评审中提出的问题。审稿人的评估是所有问题都已得到解决(见评审意见)。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/21fd/6417860/31ae7639fb70/elife-40448-fig5.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/21fd/6417860/b4f192826d8e/elife-40448-fig3-figsupp2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/21fd/6417860/3bc9e18fd6b9/elife-40448-fig4.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/21fd/6417860/31ae7639fb70/elife-40448-fig5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/21fd/6417860/0fd55bfd42f1/elife-40448-fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/21fd/6417860/f6df84bea556/elife-40448-fig1-figsupp1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/21fd/6417860/d3a229799f3c/elife-40448-fig1-figsupp2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/21fd/6417860/df26d03a9b50/elife-40448-fig1-figsupp3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/21fd/6417860/2b03e005af13/elife-40448-fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/21fd/6417860/31d85f795a1b/elife-40448-fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/21fd/6417860/65af7ee84539/elife-40448-fig3-figsupp1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/21fd/6417860/b4f192826d8e/elife-40448-fig3-figsupp2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/21fd/6417860/3bc9e18fd6b9/elife-40448-fig4.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/21fd/6417860/31ae7639fb70/elife-40448-fig5.jpg

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