ST 浏览器：用于分析和可视化空间转录组学数据集的工具。
ST viewer: a tool for analysis and visualization of spatial transcriptomics datasets.
机构信息
Department of Gene Technology, School of Engineering Sciences in Chemistry, Biotechnology and Health, KTH Royal Institute of Technology, Science for Life Laboratory, Solna, Sweden.
出版信息
Bioinformatics. 2019 Mar 15;35(6):1058-1060. doi: 10.1093/bioinformatics/bty714.
MOTIVATION
Spatial Transcriptomics (ST) is a technique that combines high-resolution imaging with spatially resolved transcriptome-wide sequencing. This novel type of data opens up many possibilities for analysis and visualization, most of which are either not available with standard tools or too complex for normal users.
RESULTS
Here, we present a tool, ST Viewer, which allows real-time interaction, analysis and visualization of Spatial Transcriptomics datasets through a seamless and smooth user interface.
AVAILABILITY AND IMPLEMENTATION
The ST Viewer is open source under a MIT license and it is available at https://github.com/SpatialTranscriptomicsResearch/st_viewer.
SUPPLEMENTARY INFORMATION
Supplementary data are available at Bioinformatics online.
动机
空间转录组学（ST）是一种将高分辨率成像与空间分辨转录组测序相结合的技术。这种新型数据为分析和可视化提供了许多可能性，其中大多数可能性要么不可用标准工具实现，要么对普通用户来说过于复杂。
结果
在这里，我们介绍了一种工具，即 ST Viewer，它通过无缝、流畅的用户界面允许对空间转录组数据集进行实时交互、分析和可视化。
可用性和实现
ST Viewer 是开源的，许可证为 MIT 许可证，可在 https://github.com/SpatialTranscriptomicsResearch/st_viewer 获得。
补充信息
补充数据可在《生物信息学》在线获得。
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