Departamento de Genetica, Centro de Biociencias, Universidade Federal de Pernambuco (UFPE), Recife, Pernambuco, Brazil.
Empresa Brasileira de Pesquisa Agropecuaria, Embrapa Soja, Londrina, Parana, Brazil.
Curr Protein Pept Sci. 2020;21(1):36-51. doi: 10.2174/1389203720666190318164905.
Thaumatin-like proteins (TLPs) are a highly complex protein family associated with host defense and developmental processes in plants, animals, and fungi. They are highly diverse in angiosperms, for which they are classified as the PR-5 (Pathogenesis-Related-5) protein family. In plants, TLPs have a variety of properties associated with their structural diversity. They are mostly associated with responses to biotic stresses, in addition to some predicted activities under drought and osmotic stresses. The present review covers aspects related to the structure, evolution, gene expression, and biotechnological potential of TLPs. The efficiency of the discovery of new TLPs is below its potential, considering the availability of omics data. Furthermore, we present an exemplary bioinformatics annotation procedure that was applied to cowpea (Vigna unguiculata) transcriptome, including libraries of two tissues (root and leaf), and two stress types (biotic/abiotic) generated using different sequencing approaches. Even without using genomic sequences, the pipeline uncovered 56 TLP candidates in both tissues and stresses. Interestingly, abiotic stress (root dehydration) was associated with a high number of modulated TLP isoforms. The nomenclature used so far for TLPs was also evaluated, considering TLP structure and possible functions identified to date. It is clear that plant TLPs are promising candidates for breeding purposes and for plant transformation aiming a better performance under biotic and abiotic stresses. The development of new therapeutic drugs against human fungal pathogens also deserves attention. Despite that, applications derived from TLP molecules are still below their potential, as it is evident in our review.
类硫氧还蛋白蛋白(TLPs)是一类与植物、动物和真菌中的宿主防御和发育过程相关的高度复杂蛋白家族。在被子植物中,TLPs 高度多样化,被归类为 PR-5(与发病相关的 5)蛋白家族。在植物中,TLPs 具有与其结构多样性相关的多种特性。它们主要与生物胁迫的反应有关,除了一些预测的干旱和渗透胁迫下的活性。本综述涵盖了 TLPs 的结构、进化、基因表达和生物技术潜力等方面。考虑到组学数据的可用性,发现新的 TLPs 的效率低于其潜力。此外,我们还提出了一个示例生物信息学注释程序,该程序应用于豇豆(Vigna unguiculata)转录组,包括两个组织(根和叶)的文库,以及使用不同测序方法生成的两种胁迫类型(生物/非生物)。即使没有使用基因组序列,该管道也在两个组织和胁迫中发现了 56 个 TLP 候选物。有趣的是,非生物胁迫(根部脱水)与大量调节的 TLP 同工型有关。迄今为止,TLPs 所使用的命名法也得到了评估,考虑到迄今为止确定的 TLP 结构和可能的功能。很明显,植物 TLPs 是用于育种和植物转化的有前途的候选物,目的是在生物和非生物胁迫下表现更好。开发针对人类真菌病原体的新型治疗药物也值得关注。尽管如此,TLP 分子的应用仍然低于其潜力,正如我们的综述所表明的那样。