Jiao Shuo, Xu Yiqin, Zhang Jie, Hao Xin, Lu Yahai
College of Urban and Environmental Sciences, Peking University, Beijing, People's Republic of China.
mSystems. 2019 Mar 26;4(2). doi: 10.1128/mSystems.00313-18. eCollection 2019 Mar-Apr.
Revealing the ecological roles of the core microbiota in community maintaining and soil nutrient cycling is crucial for understanding ecosystem function, yet there is a dearth of continental-scale studies on this fundamental topic in microbial ecology. Here, we collected 251 soil samples from adjacent pairs of maize and rice fields at a continental scale in eastern China. We revealed the major ecological roles of the core microbiota in maintaining complex connections between bacterial taxa and their associations with belowground multinutrient cycling. By identifying the habitat preferences of the core microbiota, we built a continental atlas for mapping the spatial distributions of bacteria in agro-soils, which helps forecast the responses of agricultural ecosystems to anthropogenic disturbance. The multinutrient cycling index for maize and rice soils was related to bacterial -diversity and -diversity, respectively. Rice soils exhibited higher bacterial diversity and closer bacterial cooccurrence relationships than maize soils. In contrast to the macro- or microecological latitudinal richness patterns in natural terrestrial ecosystems, the bacteria in maize soils showed higher richness at high latitudes; however, this trend was not observed in rice soils. This study provides a new perspective on the distinct bacterial biogeographic patterns to predict the ecological roles of the core microbiota in agro-soils and thus helps manage soil bacterial communities for better provisioning of key ecosystem services. Disentangling the roles of the core microbiota in community maintaining and soil nutrient cycling is an important yet poorly understood topic in microbial ecology. This study presents an exploratory effort to gain predictive understanding of the spatial atlas and ecological roles of the core microbiota. A systematic, continental-scale survey was conducted using agro-soils in adjacent pairs of maize (dryland) and rice (wetland) fields across eastern China. The results indicate that the core microbiota play major ecological roles in maintaining complex connections between bacterial taxa and are associated with belowground multinutrient cycling. A continental atlas was built for mapping the bacterial spatial distributions in agro-soils through identifying their habitat preferences. This study represents a significant advance in forecasting the responses of agricultural ecosystems to anthropogenic disturbance and thus helps manage soil bacterial communities for better provisioning of key ecosystem services-the ultimate goal of microbial ecology.
揭示核心微生物群落在群落维持和土壤养分循环中的生态作用对于理解生态系统功能至关重要,然而在微生物生态学中,关于这个基础主题的大陆尺度研究却十分匮乏。在此,我们在中国东部大陆尺度上,从相邻的玉米田和稻田中采集了251份土壤样本。我们揭示了核心微生物群落在维持细菌分类群之间的复杂联系及其与地下多种养分循环的关联方面的主要生态作用。通过确定核心微生物群落的栖息地偏好,我们构建了一个大陆图谱,用于绘制农业土壤中细菌的空间分布,这有助于预测农业生态系统对人为干扰的响应。玉米和水稻土壤的多种养分循环指数分别与细菌多样性和多样性相关。水稻土比玉米土表现出更高的细菌多样性和更紧密的细菌共现关系。与自然陆地生态系统中的宏观或微观生态纬度丰富度模式不同,玉米土壤中的细菌在高纬度地区表现出更高的丰富度;然而,在水稻土壤中未观察到这种趋势。本研究为不同的细菌生物地理模式提供了新视角,以预测农业土壤中核心微生物群落的生态作用,从而有助于管理土壤细菌群落,更好地提供关键生态系统服务。解开核心微生物群落在群落维持和土壤养分循环中的作用是微生物生态学中一个重要但了解甚少的主题。本研究为获得对核心微生物群落的空间图谱和生态作用的预测性理解做出了探索性努力。我们在中国东部相邻的玉米(旱地)和水稻(湿地)田块中使用农业土壤进行了系统的大陆尺度调查。结果表明,核心微生物群落在维持细菌分类群之间的复杂联系中发挥着主要生态作用,并与地下多种养分循环相关。通过确定其栖息地偏好,构建了一个大陆图谱来绘制农业土壤中细菌的空间分布。这项研究在预测农业生态系统对人为干扰的响应方面取得了重大进展,从而有助于管理土壤细菌群落,更好地提供关键生态系统服务——这是微生物生态学的最终目标。