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ORTHOSCOPE 分析揭示了纤维素合酶基因在所有被囊动物基因组中的存在,但在其他动物基因组中不存在。

ORTHOSCOPE Analysis Reveals the Presence of the Cellulose Synthase Gene in All Tunicate Genomes but Not in Other Animal Genomes.

机构信息

Marine Genomics Unit, Okinawa Institute of Science and Technology Graduate University, Onna, Okinawa 904-0495, Japan.

出版信息

Genes (Basel). 2019 Apr 10;10(4):294. doi: 10.3390/genes10040294.

Abstract

Tunicates or urochordates-comprising ascidians, larvaceans, and salps-are the only metazoans that can synthesize cellulose, a biological function usually associated with bacteria and plants but not animals. Tunicate cellulose or tunicine is a major component of the outer acellular coverage (tunic) of the entire body of these organisms. Previous studies have suggested that the prokaryotic cellulose synthase gene () was horizontally transferred into the genome of a tunicate ancestor. However, no convenient tools have been devised to determine whether only tunicates harbor . ORTHOSCOPE is a recently developed tool used to identify orthologous genes and to examine the phylogenic relationship of molecules within major metazoan taxa. The present analysis with this tool revealed the presence of orthologs in all sequenced tunicate genomes but an absence in other metazoan genomes. This supports an evolutionary origin of animal cellulose and provides insights into the evolution of this animal taxon.

摘要

被囊动物或尾索动物——包括海鞘、樽海鞘和磷海鞘——是唯一能够合成纤维素的后生动物,而纤维素通常与细菌和植物有关,而与动物无关。被囊动物纤维素或被囊素是这些生物整个身体的细胞外覆盖物(被囊)的主要成分。先前的研究表明,原核纤维素合酶基因()是水平转移到被囊动物祖先的基因组中的。然而,目前还没有设计出方便的工具来确定是否只有被囊动物拥有。ORTHOSCOPE 是一种最近开发的工具,用于识别直系同源基因,并研究主要后生动物分类群内分子的系统发育关系。本分析使用该工具表明,所有测序的被囊动物基因组中都存在 直系同源物,但在其他后生动物基因组中不存在。这支持了动物纤维素的进化起源,并为该动物类群的进化提供了线索。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b19b/6523144/992177c10db7/genes-10-00294-g001.jpg

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