Li Chang-Ming, Wang Nan-Nan, Zhou Liu-Yan, Wang Xin-Peng, Chen Guan-Jun, Du Zong-Jun
1Marine College, Shandong University, Weihai 264209, PR China.
2State key Laboratory of Microbial Technology, Shandong University, Qingdao 266237, PR China.
Int J Syst Evol Microbiol. 2019 Jul;69(7):1919-1925. doi: 10.1099/ijsem.0.003402. Epub 2019 Apr 17.
A Gram-stain-negative, facultative anaerobic, motile, slightly bent rod-shaped bacterium, designated strain E4404, was isolated from coastal sediment sampled Weihai, China. According to phylogenetic analysis based on its 16S rRNA gene sequence, strain E4404 shared the highest similarity with the type strain of Vibriovariabilis (97.0 %), followed by the type strains of Vibriomaritimus (96.1 %) and Vibrioeuropaeus (96.0 %). Multilocus sequence analysis based on the 16S rRNA gene and eight housekeeping genes (ftsZ, gapA, gyrB, mreB, pyrH, recA, rpoA and topA) showed that strain E4404 formed a unique clade in the genus Vibrio. The average nucleotide identity and digital DNA-DNA hybridization values between strain E4404 and some other species in the genus Vibrio were 71.0-72.7 % and 20.4-22.4 %, respectively. Cells grew at 15-37 °C and pH 6.0-8.5 in the presence of 1.0-6.0 % (w/v) NaCl, with optimal growth at 33 °C and pH 7.0-7.5 in the presence of 3.0-3.5 % (w/v) NaCl. No growth was observed on thiosulfate citrate bile salts sucrose medium. The major fatty acids of strain E4404 were summed feature 3 (C16 : 1ω7c and/or iso-C15 : 0 2-OH), C16 : 0 and summed feature 8 (C18 : 1ω6c and/or C18 : 1ω7c). The genomic DNA G+C content of strain E4404 was 46.1 mol%. Based on the phylogenetic, genotypic, phenotypic, biochemical and chemotaxonomic characteristics, strain E4404 represented a novel species of the genus Vibrio, for which the name Vibrioalbus sp. nov. is proposed. The type strain is E4404 (=MCCC 1H00197=KCTC 52890).
从中国威海采集的沿海沉积物中分离出一株革兰氏染色阴性、兼性厌氧、具运动性、稍弯曲的杆状细菌,命名为菌株E4404。基于其16S rRNA基因序列的系统发育分析表明,菌株E4404与可变弧菌模式菌株的相似性最高(97.0%),其次是海弧菌模式菌株(96.1%)和欧洲弧菌模式菌株(96.0%)。基于16S rRNA基因和8个管家基因(ftsZ、gapA、gyrB、mreB、pyrH、recA、rpoA和topA)的多位点序列分析表明,菌株E4404在弧菌属中形成了一个独特的分支。菌株E4404与弧菌属其他一些物种之间的平均核苷酸同一性和数字DNA-DNA杂交值分别为71.0-72.7%和20.4-22.4%。细胞在15-37°C和pH 6.0-8.5、NaCl浓度为1.0-6.0%(w/v)的条件下生长,在33°C、pH 7.0-7.5、NaCl浓度为3.0-3.5%(w/v)的条件下生长最佳。在硫代硫酸盐柠檬酸盐胆盐蔗糖培养基上未观察到生长。菌株E4404的主要脂肪酸为总和特征3(C16:1ω7c和/或异-C15:0 2-OH)、C16:0和总和特征8(C18:1ω6c和/或C18:1ω7c)。菌株E4404的基因组DNA G+C含量为46.1 mol%。基于系统发育、基因型、表型、生化和化学分类学特征,菌株E4404代表弧菌属的一个新物种,为此提出新名称白色弧菌(Vibrio albus sp. nov.)。模式菌株为E4404(=MCCC 1H00197=KCTC 52890)。