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中江鞘氨醇单胞菌新种,从红松根际分离得到。

Sphingobium chungangianum sp. nov., isolated from rhizosphere of Pinus koraiensis.

机构信息

Department of Food and Nutrition, College of Biotechnology and Natural Resource, Chung-Ang University, Anseong-si, Gyeonggi-do, 17546, Republic of Korea.

出版信息

Antonie Van Leeuwenhoek. 2019 Sep;112(9):1341-1348. doi: 10.1007/s10482-019-01266-8. Epub 2019 Apr 17.

Abstract

A novel Gram-staining negative, yellow-pigmented, non-motile, aerobic and rod-shaped bacterium, designated MAH-11, was isolated from rhizosphere of Pinus koraiensis and was characterised by using a polyphasic taxonomic approach. The colonies were smooth, circular and 0.3-1.0 mm in diameter when grown on R2A agar for 3 days. The strain was positive for both catalase and oxidase tests. Optimum growth temperature and pH were 28-30 °C and 7.0, respectively. Cell growth occurs on R2A agar, nutrient agar, Luria-Bertani agar and tryptone soya agar but not on MacConkey agar. The novel strain was found to be able to hydrolyse esculin but not casein, gelatin, starch, L-tyrosine, DNA, L-arginine, urea, Tween 20 and Tween 80. On the basis of 16S rRNA gene sequence analysis, strain MAH-11 belongs to the genus Sphingobium and is closely related to Sphingobium quisquiliarum P25 (98.1%), Sphingobium vermicomposti VC-230 (97.8%), Sphingobium mellinum WI4 (97.5%), Sphingobium barthaii KK22 (97.2%) and Sphingobium fuliginis TKP (97.2%). In DNA-DNA hybridization tests, the DNA relatedness values between strain MAH-11 and its close phylogenetic neighbors were below 45.0%. The DNA G+C content was 64.5 mol% and the predominant respiratory quinone was identified as ubiquinone-10. The major cellular fatty acids were summed feature 8 (Cω7c and/or Cω6c), summed feature 3 (Cω7c and/or Cω6c) and C. The DNA-DNA hybridization results in combination with chemotaxonomic and physiological data demonstrated that strain MAH-11 represents a novel species within the genus Sphingobium, for which the name Sphingobium chungangianum is proposed. The type strain is MAH-11 (= KACC 19836 = CGMCC 1.13749).

摘要

一株新型革兰氏阴性、黄色、非运动、需氧、杆状细菌,命名为 MAH-11,从红松根际分离得到,并采用多相分类学方法进行了描述。该菌株在 R2A 琼脂上培养 3 天时,菌落光滑、圆形,直径为 0.3-1.0mm。该菌株过氧化氢酶和氧化酶试验均为阳性。最适生长温度和 pH 值分别为 28-30°C 和 7.0。该菌株能够在 R2A 琼脂、营养琼脂、Luria-Bertani 琼脂和胰蛋白胨大豆琼脂上生长,但不能在 MacConkey 琼脂上生长。该新菌株能够水解表儿茶素但不能水解酪蛋白、明胶、淀粉、L-酪氨酸、DNA、L-精氨酸、尿素、吐温 20 和吐温 80。根据 16S rRNA 基因序列分析,菌株 MAH-11 属于鞘氨醇单胞菌属,与鞘氨醇单胞菌 P25(98.1%)、鞘氨醇单胞菌 vermicomposti VC-230(97.8%)、鞘氨醇单胞菌 mellinum WI4(97.5%)、鞘氨醇单胞菌 Barthaii KK22(97.2%)和鞘氨醇单胞菌 fuliginis TKP(97.2%)密切相关。在 DNA-DNA 杂交试验中,菌株 MAH-11 与其近亲的 DNA 相关值低于 45.0%。DNA G+C 含量为 64.5mol%,主要呼吸醌为泛醌-10。主要细胞脂肪酸为总和特征 8(Cω7c 和/或 Cω6c)、总和特征 3(Cω7c 和/或 Cω6c)和 C。DNA-DNA 杂交结果结合化学分类和生理数据表明,菌株 MAH-11 代表鞘氨醇单胞菌属中的一个新种,建议命名为 Chungangian 鞘氨醇单胞菌。模式菌株为 MAH-11(=KACC 19836=CGMCC 1.13749)。

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