Nakashima Karina K, Vibhute Mahesh A, Spruijt Evan
Institute for Molecules and Materials, Radboud University, Nijmegen, Netherlands.
Front Mol Biosci. 2019 Apr 3;6:21. doi: 10.3389/fmolb.2019.00021. eCollection 2019.
Biochemical processes inside the cell take place in a complex environment that is highly crowded, heterogeneous, and replete with interfaces. The recently recognized importance of biomolecular condensates in cellular organization has added new elements of complexity to our understanding of chemistry in the cell. Many of these condensates are formed by liquid-liquid phase separation (LLPS) and behave like liquid droplets. Such droplet organelles can be reproduced and studied by using coacervates and have some remarkable features, including regulated assembly, differential partitioning of macromolecules, permeability to small molecules, and a uniquely crowded environment. Here, we review the main principles of biochemical organization in model membraneless compartments. We focus on some promising coacervate model systems that aptly mimic part of the compartmentalized cellular environment. We address the physicochemical characteristics of these liquid phase separated compartments, and their impact on biomolecular chemistry and assembly. These model systems enable a systematic investigation of the role of spatiotemporal organization of biomolecules in controlling biochemical processes in the cell, and they provide crucial insights for the development of functional artificial organelles and cells.
细胞内的生化过程发生在一个高度拥挤、异质且充满界面的复杂环境中。生物分子凝聚物在细胞组织中最近被认识到的重要性,为我们对细胞内化学的理解增添了新的复杂元素。这些凝聚物中的许多是通过液-液相分离(LLPS)形成的,并且表现得像液滴。这种液滴细胞器可以通过使用凝聚物来重现和研究,并且具有一些显著特征,包括调控组装、大分子的差异分配、对小分子的渗透性以及独特的拥挤环境。在这里,我们回顾了模型无膜隔室中生化组织的主要原理。我们关注一些有前景的凝聚物模型系统,它们恰当地模拟了部分分隔的细胞环境。我们讨论了这些液相分离隔室的物理化学特征,以及它们对生物分子化学和组装的影响。这些模型系统能够系统地研究生物分子的时空组织在控制细胞内生化过程中的作用,并且它们为功能性人工细胞器和细胞的开发提供了关键见解。