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从少量细胞生长:初始随机性和细胞间变异性的综合影响。

Growing from a few cells: combined effects of initial stochasticity and cell-to-cell variability.

机构信息

1 LadHyX and Department of Mechanics, Ecole Polytechnique, CNRS , 91128 Palaiseau , France.

2 Department Genomes and Genetics, Physical microfluidics and Bioengineering, Institut Pasteur , 75015 Paris , France.

出版信息

J R Soc Interface. 2019 Apr 26;16(153):20180935. doi: 10.1098/rsif.2018.0935.

Abstract

The growth of a cell population from a large inoculum appears deterministic, although the division process is stochastic at the single-cell level. Microfluidic observations, however, display wide variations in the growth of small populations. Here we combine theory, simulations and experiments to explore the link between single-cell stochasticity and the growth of a population starting from a small number of individuals. The study yields descriptors of the probability distribution function (PDF) of the population size under three sources of stochasticity: cell-to-cell variability, uncertainty in the number of initial cells and generation-dependent division times. The PDF, rescaled to account for the exponential growth of the population, is found to converge to a stationary distribution. All moments of the PDF grow exponentially with the same growth rate, which depends solely on cell-to-cell variability. The shape of the PDF, however, contains the signature of all sources of stochasticity, and is dominated by the early stages of growth, and not by the cell-to-cell variability. Thus, probabilistic predictions of the growth of bacterial populations can be obtained with implications for both naturally occurring conditions and technological applications of single-cell microfluidics.

摘要

细胞群体从大接种物的生长似乎是确定性的,尽管在单细胞水平上分裂过程是随机的。然而,微流控观察显示小群体的生长存在广泛的变化。在这里,我们结合理论、模拟和实验来探索从少数个体开始的单细胞随机性与群体生长之间的联系。该研究产生了种群大小概率分布函数 (PDF) 的描述符,其中考虑了三种随机性来源:细胞间变异性、初始细胞数量的不确定性和世代相关的分裂时间。将 PDF 缩放以考虑种群的指数增长,发现它收敛到一个稳定分布。PDF 的所有矩都以相同的增长率呈指数增长,该增长率仅取决于细胞间变异性。然而,PDF 的形状包含了所有随机性来源的特征,并且主要由生长的早期阶段决定,而不是由细胞间变异性决定。因此,可以对细菌种群的生长进行概率预测,这对自然发生的条件和单细胞微流控技术应用都有影响。

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