• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

生物大分子中低频运动的起源。准连续性模型的近期进展综述。

Origin of low-frequency motions in biological macromolecules. A view of recent progress in the quasi-continuity model.

作者信息

Chou K C

出版信息

Biophys Chem. 1986 Dec 15;25(2):105-16. doi: 10.1016/0301-4622(86)87001-6.

DOI:10.1016/0301-4622(86)87001-6
PMID:3101760
Abstract

The recent progress in the quasi-continuity model and its applications in studying the low-frequency internal motions of biological macromolecules have been surveyed. Emphasis is placed on revealing the origin of this kind of internal collective motion, which involves many atoms and has significant biological functions. In light of such a line, the low-frequency motions in alpha-helix structure, beta-structure (including beta-sheet and beta-barrel), and DNA double-helix structure, the three most fundamental component elements in biological macromolecules, are discussed, and the corresponding physical pictures described. It turns out that the low-frequency motion in biological macromolecules originates from their two common intrinsic characteristics, i.e., they possess a series of weak bonds, such as hydrogen bonds and salt bridges, and a substantial mass distributed over the region containing those weak bonds.

摘要

本文综述了准连续模型的最新进展及其在研究生物大分子低频内部运动中的应用。重点在于揭示这种涉及多个原子且具有重要生物学功能的内部集体运动的起源。基于此,讨论了生物大分子中三个最基本组成元素,即α-螺旋结构、β-结构(包括β-折叠和β-桶)以及DNA双螺旋结构中的低频运动,并描述了相应的物理图像。结果表明,生物大分子中的低频运动源于其两个共同的固有特性,即它们拥有一系列弱键,如氢键和盐桥,以及分布在包含这些弱键区域的大量质量。

相似文献

1
Origin of low-frequency motions in biological macromolecules. A view of recent progress in the quasi-continuity model.生物大分子中低频运动的起源。准连续性模型的近期进展综述。
Biophys Chem. 1986 Dec 15;25(2):105-16. doi: 10.1016/0301-4622(86)87001-6.
2
Low-frequency motions in protein molecules. Beta-sheet and beta-barrel.蛋白质分子中的低频运动。β折叠和β桶。
Biophys J. 1985 Aug;48(2):289-97. doi: 10.1016/S0006-3495(85)83782-6.
3
Biological functions of low-frequency vibrations (phonons). III. Helical structures and microenvironment.低频振动(声子)的生物学功能。III. 螺旋结构与微环境。
Biophys J. 1984 May;45(5):881-9. doi: 10.1016/S0006-3495(84)84234-4.
4
Identification of low-frequency modes in protein molecules.蛋白质分子中低频模式的识别。
Biochem J. 1983 Dec 1;215(3):465-9. doi: 10.1042/bj2150465.
5
Normal modes for specific motions of macromolecules: application to the hinge-bending mode of lysozyme.大分子特定运动的正常模式:应用于溶菌酶的铰链弯曲模式。
Proc Natl Acad Sci U S A. 1985 Aug;82(15):4995-9. doi: 10.1073/pnas.82.15.4995.
6
Efficient characterization of collective motions and interresidue correlations in proteins by low-resolution simulations.通过低分辨率模拟对蛋白质中的集体运动和残基间相关性进行有效表征。
Biochemistry. 1997 Nov 4;36(44):13512-23. doi: 10.1021/bi971611f.
7
Molecular dynamics simulations of peptides and proteins with amplified collective motions.具有增强集体运动的肽和蛋白质的分子动力学模拟
Biophys J. 2003 Jun;84(6):3583-93. doi: 10.1016/S0006-3495(03)75090-5.
8
The refined crystal structure of Bacillus cereus oligo-1,6-glucosidase at 2.0 A resolution: structural characterization of proline-substitution sites for protein thermostabilization.蜡样芽孢杆菌寡聚-1,6-葡萄糖苷酶在2.0埃分辨率下的精细晶体结构:用于蛋白质热稳定性的脯氨酸取代位点的结构表征。
J Mol Biol. 1997 May 30;269(1):142-53. doi: 10.1006/jmbi.1997.1018.
9
Statistical and molecular dynamics studies of buried waters in globular proteins.球状蛋白质中埋藏水的统计与分子动力学研究。
Proteins. 2005 Aug 15;60(3):450-63. doi: 10.1002/prot.20511.
10
Recurrent alpha beta loop structures in TIM barrel motifs show a distinct pattern of conserved structural features.TIM桶状基序中反复出现的αβ环结构呈现出独特的保守结构特征模式。
Proteins. 1992 Apr;12(4):299-313. doi: 10.1002/prot.340120402.

引用本文的文献

1
Study of peptide fingerprints of parasite proteins and drug-DNA interactions with Markov-Mean-Energy invariants of biopolymer molecular-dynamic lattice networks.利用生物聚合物分子动力学晶格网络的马尔可夫平均能量不变量研究寄生虫蛋白质的肽指纹图谱及药物与DNA的相互作用。
Polymer (Guildf). 2009 Jul 17;50(15):3857-3870. doi: 10.1016/j.polymer.2009.05.055. Epub 2009 Jun 3.
2
Scoring function for DNA-drug docking of anticancer and antiparasitic compounds based on spectral moments of 2D lattice graphs for molecular dynamics trajectories.基于二维格点图的分子动力学轨迹谱矩的抗癌和抗寄生虫化合物与 DNA 对接的评分函数。
Eur J Med Chem. 2009 Nov;44(11):4461-9. doi: 10.1016/j.ejmech.2009.06.011. Epub 2009 Jun 17.
3
Quasi-continuum models of twist-like and accordion-like low-frequency motions in DNA.
DNA中扭结状和手风琴状低频运动的准连续介质模型。
Biophys J. 1989 Aug;56(2):295-305. doi: 10.1016/S0006-3495(89)82676-1.