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XoxG 和 XoxJ 的生化和结构特征及其在镧系元素依赖型甲醇脱氢酶活性中的作用。

Biochemical and Structural Characterization of XoxG and XoxJ and Their Roles in Lanthanide-Dependent Methanol Dehydrogenase Activity.

机构信息

Department of Chemistry, The Pennsylvania State University, University Park, PA, 16802, USA.

Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, PA, 16802, USA.

出版信息

Chembiochem. 2019 Sep 16;20(18):2360-2372. doi: 10.1002/cbic.201900184. Epub 2019 Aug 7.

Abstract

Lanthanide (Ln)-dependent methanol dehydrogenases (MDHs) have recently been shown to be widespread in methylotrophic bacteria. Along with the core MDH protein, XoxF, these systems contain two other proteins, XoxG (a c-type cytochrome) and XoxJ (a periplasmic binding protein of unknown function), about which little is known. In this work, we have biochemically and structurally characterized these proteins from the methyltroph Methylobacterium extorquens AM1. In contrast to results obtained in an artificial assay system, assays of XoxFs metallated with La , Ce , and Nd using their physiological electron acceptor, XoxG, display Ln-independent activities, but the K for XoxG markedly increases from La to Nd. This result suggests that XoxG's redox properties are tuned specifically for lighter Lns in XoxF, an interpretation supported by the unusually low reduction potential of XoxG (+172 mV). The X-ray crystal structure of XoxG provides a structural basis for this reduction potential and insight into the XoxG-XoxF interaction. Finally, the X-ray crystal structure of XoxJ reveals a large hydrophobic cleft and suggests a role in the activation of XoxF. These studies enrich our understanding of the underlying chemical principles that enable the activity of XoxF with multiple lanthanides in vitro and in vivo.

摘要

镧系(Ln)依赖的甲醇脱氢酶(MDH)最近被证明在甲基营养细菌中广泛存在。除了核心 MDH 蛋白 XoxF 外,这些系统还包含另外两种蛋白质,XoxG(一种 c 型细胞色素)和 XoxJ(一种未知功能的周质结合蛋白),关于这两种蛋白质知之甚少。在这项工作中,我们从甲基营养菌 Methylobacterium extorquens AM1 中对这些蛋白质进行了生化和结构表征。与在人工测定系统中获得的结果相反,使用其生理电子受体 XoxG 对用 La、Ce 和 Nd 金属化的 XoxFs 的测定显示出 Ln 非依赖性活性,但 XoxG 的 K 值从 La 到 Nd 明显增加。这一结果表明,XoxG 的氧化还原性质是专门针对 XoxF 中的较轻 Ln 进行调整的,这一解释得到了 XoxG 异常低的还原电位(+172 mV)的支持。XoxG 的 X 射线晶体结构为该还原电位提供了结构基础,并深入了解了 XoxG-XoxF 相互作用。最后,XoxJ 的 X 射线晶体结构揭示了一个大的疏水性裂缝,并表明其在 XoxF 激活中的作用。这些研究丰富了我们对使 XoxF 在体外和体内与多种镧系元素具有活性的潜在化学原理的理解。

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