• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

空洞性视盘异常中的进行性视神经改变:整合拷贝数变异和顺式表达数量性状位点以评估疾病病因

Progressive optic nerve changes in cavitary optic disc anomaly: integration of copy number alteration and cis-expression quantitative trait loci to assess disease etiology.

作者信息

Hwang Eileen S, Morgan Denise J, Pennington Katie L, Owen Leah A, Fingert John H, Bernstein Paul S, DeAngelis Margaret M

机构信息

Department of Ophthalmology and Visual Sciences, John A. Moran Eye Center, University of Utah School of Medicine, 65 Mario Capecchi Drive, Salt Lake City, UT, 84132, USA.

Department of Ophthalmology and Visual Sciences, Carver College of Medicine, University of Iowa, Iowa City, IA, USA.

出版信息

BMC Med Genet. 2019 Apr 27;20(1):63. doi: 10.1186/s12881-019-0800-4.

DOI:10.1186/s12881-019-0800-4
PMID:31029096
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6487068/
Abstract

BACKGROUND

We performed clinical and genetic characterization of a family with cavitary optic disc anomaly (CODA), an autosomal dominant condition that causes vision loss due to adult-onset maculopathy in the majority of cases. CODA is characterized by a variably excavated optic nerve appearance such as morning glory, optic pit, atypical coloboma, and severe optic nerve cupping.

METHODS

Four affected and fourteen unaffected family members of a multi-generation pedigree were phenotyped by visual acuity, intraocular pressure, dilated fundus examination, fundus photography, and optical coherence tomography. Genetic analysis was performed by breakpoint polymerase chain reaction (PCR), long range PCR, and direct Sanger sequencing. The functional relevance of the copy number alteration region was assessed by in silico analysis.

RESULTS

We found progressive optic nerve cupping in three affected members of a family with CODA. In one individual, an optic pit developed over time from a normal optic nerve. By two independent methods, we detected a previously described intergenic triplication that segregated with disease in all adults of the family. The copy number alteration was also detected in five children with normal optic nerves. eQTL analysis demonstrated that this CNA region regulates expression of up to 4 genes in cis.

CONCLUSIONS

Morning glory, optic pit and atypical coloboma are currently considered congenital anomalies of the optic nerve, but our data indicate that in CODA, the excavated optic nerve appearance may develop after birth and into adulthood. In silico analysis of the CNA, may explain why vairable expressivity is observed in CODA.

摘要

背景

我们对一个患有空洞性视盘异常(CODA)的家族进行了临床和基因特征分析,CODA是一种常染色体显性疾病,在大多数情况下会因成人期黄斑病变导致视力丧失。CODA的特征是视神经外观呈不同程度的凹陷,如牵牛花综合征、视盘小凹、非典型缺损和严重的视神经杯状凹陷。

方法

对一个多代家系中的4名患病和14名未患病家庭成员进行了视力、眼压、散瞳眼底检查、眼底摄影和光学相干断层扫描等表型分析。通过断点聚合酶链反应(PCR)、长程PCR和直接桑格测序进行基因分析。通过计算机分析评估拷贝数改变区域的功能相关性。

结果

我们在一个患有CODA的家族的3名患病成员中发现了进行性视神经杯状凹陷。在一个个体中,视盘小凹随着时间的推移从正常视神经发展而来。通过两种独立的方法,我们检测到一个先前描述的基因间重复,该重复在家族中的所有成年人中与疾病分离。在5名视神经正常的儿童中也检测到了拷贝数改变。eQTL分析表明,这个拷贝数改变区域在顺式中调节多达4个基因的表达。

结论

牵牛花综合征、视盘小凹和非典型缺损目前被认为是先天性视神经异常,但我们的数据表明,在CODA中,凹陷的视神经外观可能在出生后并持续到成年期才出现。对拷贝数改变的计算机分析可能解释了为什么在CODA中观察到可变表达。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bd43/6487068/427b8b193c08/12881_2019_800_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bd43/6487068/916aa2ebb216/12881_2019_800_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bd43/6487068/2d17fc904136/12881_2019_800_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bd43/6487068/b6f4df9fa5ea/12881_2019_800_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bd43/6487068/ed1f2bf26ba1/12881_2019_800_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bd43/6487068/427b8b193c08/12881_2019_800_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bd43/6487068/916aa2ebb216/12881_2019_800_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bd43/6487068/2d17fc904136/12881_2019_800_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bd43/6487068/b6f4df9fa5ea/12881_2019_800_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bd43/6487068/ed1f2bf26ba1/12881_2019_800_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bd43/6487068/427b8b193c08/12881_2019_800_Fig5_HTML.jpg

相似文献

1
Progressive optic nerve changes in cavitary optic disc anomaly: integration of copy number alteration and cis-expression quantitative trait loci to assess disease etiology.空洞性视盘异常中的进行性视神经改变:整合拷贝数变异和顺式表达数量性状位点以评估疾病病因
BMC Med Genet. 2019 Apr 27;20(1):63. doi: 10.1186/s12881-019-0800-4.
2
Familial cavitary optic disk anomalies: clinical features of a large family with examples of progressive optic nerve head cupping.家族性空洞性视盘异常:一个大家庭的临床特征及进行性视神经乳头杯状凹陷实例
Am J Ophthalmol. 2007 May;143(5):788-794. doi: 10.1016/j.ajo.2007.01.029. Epub 2007 Mar 23.
3
Evaluation of congenital excavated optic disc anomalies with spectral-domain and swept-source optical coherence tomography.使用频域和扫频光学相干断层扫描技术评估先天性凹陷性视盘异常
Graefes Arch Clin Exp Ophthalmol. 2014 Nov;252(11):1853-60. doi: 10.1007/s00417-014-2680-9. Epub 2014 Jun 7.
4
Heterozygous triplication of upstream regulatory sequences leads to dysregulation of matrix metalloproteinase 19 in patients with cavitary optic disc anomaly.上游调控序列的杂合性三联体导致空洞性视盘异常患者基质金属蛋白酶19的表达失调。
Hum Mutat. 2015 Mar;36(3):369-78. doi: 10.1002/humu.22754.
5
Renal coloboma syndrome.肾缺损综合征
Ophthalmology. 2001 Oct;108(10):1912-6. doi: 10.1016/s0161-6420(01)00722-9.
6
The spectrum of cavitary optic disc anomalies in a family.
Ophthalmology. 1989 Mar;96(3):342-7. doi: 10.1016/s0161-6420(89)32886-7.
7
Progressive optic nerve cupping and neural rim decrease in a patient with bilateral autosomal dominant optic nerve colobomas.一名患有双侧常染色体显性遗传性视神经缺损的患者出现进行性视神经杯状凹陷和神经边缘缩小。
Am J Ophthalmol. 2000 Apr;129(4):517-20. doi: 10.1016/s0002-9394(99)00463-8.
8
Intrafamilial heterogeneity of congenital optic disc pit maculopathy.先天性视盘小凹黄斑病变的家族内异质性。
Ophthalmic Genet. 2017 May-Jun;38(3):267-272. doi: 10.1080/13816810.2016.1188120. Epub 2016 Jun 8.
9
Radial peripapillary capillary network in congenital cavitary optic disk anomalies.先天性空洞性视神经盘异常的视盘周围毛细血管网。
Indian J Ophthalmol. 2023 Mar;71(3):1058. doi: 10.4103/IJO.IJO_2743_22.
10
High myopia-excavated optic disc anomaly associated with a frameshift mutation in the MYC-binding protein 2 gene (MYCBP2).高度近视性视神经盘凹陷异常与MYC结合蛋白2基因(MYCBP2)的移码突变相关。
Am J Ophthalmol. 2015 May;159(5):973-9.e2. doi: 10.1016/j.ajo.2015.01.021. Epub 2015 Jan 26.

引用本文的文献

1
Biallelic NSUN3 Variants Cause Diverse Phenotypic Spectrum Disease: From Isolated Optic Atrophy to Severe Early-Onset Mitochondrial Disorder.双等位基因NSUN3变异导致多种表型谱疾病:从孤立性视神经萎缩到严重早发性线粒体疾病。
Invest Ophthalmol Vis Sci. 2025 Jun 2;66(6):17. doi: 10.1167/iovs.66.6.17.

本文引用的文献

1
Ensembl 2018.Ensembl 2018.
Nucleic Acids Res. 2018 Jan 4;46(D1):D754-D761. doi: 10.1093/nar/gkx1098.
2
The UCSC Genome Browser database: 2018 update.UCSC 基因组浏览器数据库:2018 年更新。
Nucleic Acids Res. 2018 Jan 4;46(D1):D762-D769. doi: 10.1093/nar/gkx1020.
3
Genetic effects on gene expression across human tissues.基因对人体各组织基因表达的影响。
Nature. 2017 Oct 11;550(7675):204-213. doi: 10.1038/nature24277.
4
Mapping the genomic landscape of inherited retinal disease genes prioritizes genes prone to coding and noncoding copy-number variations.绘制遗传性视网膜疾病基因的基因组图谱,优先考虑易发生编码和非编码拷贝数变异的基因。
Genet Med. 2018 Feb;20(2):202-213. doi: 10.1038/gim.2017.97. Epub 2017 Jul 27.
5
MMP19 expression in the human optic nerve.MMP19在人视神经中的表达。
Mol Vis. 2016 Dec 14;22:1429-1436. eCollection 2016.
6
Heterozygous triplication of upstream regulatory sequences leads to dysregulation of matrix metalloproteinase 19 in patients with cavitary optic disc anomaly.上游调控序列的杂合性三联体导致空洞性视盘异常患者基质金属蛋白酶19的表达失调。
Hum Mutat. 2015 Mar;36(3):369-78. doi: 10.1002/humu.22754.
7
Long-term outcomes of pars plana vitrectomy without internal limiting membrane peeling for optic disc pit maculopathy.孔源性视盘视网膜劈裂黄斑病变行平坦部玻璃体切割术联合内界膜剥除术后的长期疗效观察。
Eye (Lond). 2013 Dec;27(12):1359-67. doi: 10.1038/eye.2013.172. Epub 2013 Sep 13.
8
Expression quantitative trait loci: present and future.表达数量性状基因座:现在和未来。
Philos Trans R Soc Lond B Biol Sci. 2013 May 6;368(1620):20120362. doi: 10.1098/rstb.2012.0362. Print 2013.
9
Vitrectomy for optic disk pit with macular schisis and outer retinal dehiscence.玻璃体切割术治疗伴黄斑劈裂和外层视网膜脱离的视盘小凹。
Retina. 2012 Jul;32(7):1337-42. doi: 10.1097/IAE.0b013e318235d8fc.
10
Macular schisis and detachment associated with presumed acquired enlarged optic nerve head cups.黄斑劈裂和脱离与疑似获得性视神经乳头杯扩大相关。
Am J Ophthalmol. 2007 Jul;144(1):70-74. doi: 10.1016/j.ajo.2007.03.027. Epub 2007 May 9.