1 Targeted Therapeutic Drug Discovery and Development Program, College of Pharmacy, The University of Texas at Austin, Austin, TX, USA.
2 Department of Molecular Biosciences, College of Natural Science, The University of Texas at Austin, Austin, TX, USA.
SLAS Discov. 2019 Jun;24(5):597-605. doi: 10.1177/2472555219844572. Epub 2019 Apr 30.
Iron is an essential requirement for the survival and virulence for bacteria. The bacterial ferrous iron transporter protein B (FeoB) functions as a major iron transporter in prokaryotes and has an N-terminal domain (NFeoB) with homology to eukaryotic G-proteins. Its GTPase activity is required for ferrous iron uptake, making it a potential target for antivirulence therapies. Here, two assay strategies relying on different spectroscopic readouts are described to monitor NFeoB GTPase activity. The first one is the colorimetric-based platform that utilizes a malachite green reagent to monitor phosphate production from GTP hydrolysis. The absorbance change directly relates to the GTPase activity of NFeoB. The assay was further improved by the addition of Tween-20 and miniaturized in a 384-well plate format with a 10 µL assay volume. The second format is a luminescence-based platform, measuring the GTP depletion by using a modified GTPase-Glo assay from Promega. In this platform, the luminescence signal correlates to the amount of GTP remaining, allowing for the direct calculation of GTP hydrolysis by NFeoB. The colorimetric platform was tested in a high-throughput manner against a custom-assembled library of a~2000 small molecules and was found to be simple, cost-effective, and robust. Additionally, the luminescence-based platform demonstrated its capability as an orthogonal assay to monitor GTPase activity, providing a valid and convenient method to filter false hits. These two assay platforms are proven to offset the limitations of each platform while enhancing overall quality and success rates.
铁是细菌生存和毒力所必需的。细菌亚铁转运蛋白 B(FeoB)作为原核生物中的主要铁转运蛋白,其 N 端结构域(NFeoB)与真核 G 蛋白具有同源性。其 GTP 酶活性是亚铁摄取所必需的,使其成为抗毒力治疗的潜在靶点。在这里,描述了两种依赖于不同光谱读数的测定策略来监测 NFeoB GTP 酶活性。第一种是基于比色的平台,利用孔雀绿试剂监测 GTP 水解产生的磷酸盐。吸光度变化直接与 NFeoB 的 GTP 酶活性相关。通过添加吐温-20 并将其在 384 孔板格式中进行微型化(测定体积为 10 µL),对该测定进行了进一步改进。第二种格式是基于发光的平台,通过使用 Promega 的改良 GTPase-Glo 测定法测量 GTP 的消耗。在该平台中,发光信号与剩余 GTP 的量相关,允许直接计算 NFeoB 的 GTP 水解。比色平台以高通量方式针对一个约 2000 个小分子的定制文库进行了测试,结果表明该平台简单、具有成本效益且稳健。此外,发光平台证明了其作为监测 GTP 酶活性的正交测定法的能力,提供了一种有效的、方便的方法来筛选假阳性。这两种测定平台证明可以弥补每个平台的局限性,同时提高整体质量和成功率。