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柔性到刚性的转变是 ABC 转运体 BmrA 中底物转运的核心。

Flexible-to-rigid transition is central for substrate transport in the ABC transporter BmrA from .

机构信息

1Molecular Microbiology and Structural Biochemistry, UMR 5086 CNRS/Université de Lyon, Labex Ecofect, 7, passage de Vercors, 69367 Lyon, France.

2Physical Chemistry, ETH Zurich, Vladimir-Prelog-Weg 2, 8093 Zurich, Switzerland.

出版信息

Commun Biol. 2019 Apr 29;2:149. doi: 10.1038/s42003-019-0390-x. eCollection 2019.

Abstract

ATP-binding-cassette (ABC) transporters are molecular pumps that translocate molecules across the cell membrane by switching between inward-facing and outward-facing states. To obtain a detailed understanding of their mechanism remains a challenge to structural biology, as these proteins are notoriously difficult to study at the molecular level in their active, membrane-inserted form. Here we use solid-state NMR to investigate the multidrug ABC transporter BmrA reconstituted in lipids. We identify the chemical-shift differences between the inward-facing, and outward-facing state induced by ATP:Mg:Vi addition. Analysis of an X-loop mutant, for which we show that ATPase and transport activities are uncoupled, reveals an incomplete transition to the outward-facing state upon ATP:Mg:Vi addition, notably lacking the decrease in dynamics of a defined set of residues observed in wild-type BmrA. This suggests that this stiffening is required for an efficient transmission of the conformational changes to allow proper transport of substrate by the pump.

摘要

ATP 结合盒(ABC)转运蛋白是分子泵,通过在内向和外向状态之间切换将分子转运穿过细胞膜。对于结构生物学来说,要深入了解它们的机制仍然是一个挑战,因为这些蛋白质在其活性的、插入膜中的形式在分子水平上很难研究。在这里,我们使用固态 NMR 研究了在脂质中重建的多药 ABC 转运蛋白 BmrA。我们确定了由 ATP:Mg:Vi 添加引起的内向和外向状态之间的化学位移差异。对 X 环突变体的分析表明,ATP 酶和转运活性解耦,在添加 ATP:Mg:Vi 时,不能完全转变为外向状态,明显缺乏在野生型 BmrA 中观察到的一组特定残基的动态降低。这表明这种僵化对于有效传递构象变化以允许泵正确转运底物是必需的。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8b2b/6488656/599dacd5b0a6/42003_2019_390_Fig1_HTML.jpg

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