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来自大型建筑热水系统的七株嗜肺军团菌分离株的基因组序列草图

Draft Genome Sequences of Seven Legionella pneumophila Isolates from a Hot Water System of a Large Building.

作者信息

Gomez-Alvarez Vicente, Boczek Laura, King Dawn, Pemberton Adin, Pfaller Stacy, Rodgers Mark, SantoDomingo Jorge, Revetta Randy P

机构信息

Office of Research and Development, U.S. Environmental Protection Agency, Cincinnati, Ohio, USA

Office of Research and Development, U.S. Environmental Protection Agency, Cincinnati, Ohio, USA.

出版信息

Microbiol Resour Announc. 2019 May 2;8(18):e00384-19. doi: 10.1128/MRA.00384-19.

DOI:10.1128/MRA.00384-19
PMID:31048385
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6498240/
Abstract

Public health data show that a significant fraction of the nation's waterborne disease outbreaks are attributable to premise plumbing. We report the draft genome sequences of seven serogroup 1 isolates from hot water lines of a large building. Genomic analysis identified the isolates as belonging to sequence type 1.

摘要

公共卫生数据显示，该国相当一部分水源性疾病暴发可归因于建筑物内部管道系统。我们报告了从一座大型建筑的热水管道中分离出的7株1血清群菌株的基因组序列草图。基因组分析确定这些分离株属于序列型1。

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本文引用的文献

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Spatial structuring of a Legionella pneumophila population within the water system of a large occupational building.大型办公建筑供水系统中嗜肺军团菌种群的空间结构。
Microb Genom. 2018 Oct;4(10). doi: 10.1099/mgen.0.000226. Epub 2018 Oct 12.
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Microbiology of the built environment.建筑环境微生物学。
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Comparative genome analysis reveals a complex population structure of Legionella pneumophila subspecies.比较基因组分析揭示了嗜肺军团菌亚种的复杂种群结构。
Infect Genet Evol. 2018 Apr;59:172-185. doi: 10.1016/j.meegid.2018.02.008. Epub 2018 Feb 7.
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MentaLiST - A fast MLST caller for large MLST schemes.MentaLiST - 一种适用于大型 MLST 方案的快速 MLST 调用程序。
Microb Genom. 2018 Feb;4(2). doi: 10.1099/mgen.0.000146. Epub 2018 Jan 10.
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Minimum inhibitory concentration (MIC) distribution among wild-type strains of Legionella pneumophila identifies a subpopulation with reduced susceptibility to macrolides owing to efflux pump genes.嗜肺军团菌野生型菌株的最小抑菌浓度（MIC）分布表明，由于外排泵基因的存在，存在对大环内酯类药物敏感性降低的亚群。
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Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads.单轮循环器：从短读长和长读长测序数据中解析细菌基因组组装结果
PLoS Comput Biol. 2017 Jun 8;13(6):e1005595. doi: 10.1371/journal.pcbi.1005595. eCollection 2017 Jun.
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A large-scale evaluation of algorithms to calculate average nucleotide identity.计算平均核苷酸一致性的算法的大规模评估。
Antonie Van Leeuwenhoek. 2017 Oct;110(10):1281-1286. doi: 10.1007/s10482-017-0844-4. Epub 2017 Feb 15.
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Macrolide resistance in Legionella pneumophila: the role of LpeAB efflux pump.嗜肺军团菌中的大环内酯类耐药性：LpeAB 外排泵的作用。
J Antimicrob Chemother. 2017 May 1;72(5):1327-1333. doi: 10.1093/jac/dkw594.
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Complete Genome Sequences of the Historical Legionella pneumophila Strains OLDA and Pontiac.嗜肺军团菌历史菌株OLDA和庞蒂亚克的全基因组序列
Genome Announc. 2016 Aug 25;4(4):e00866-16. doi: 10.1128/genomeA.00866-16.
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Legionella pneumophila: The Paradox of a Highly Sensitive Opportunistic Waterborne Pathogen Able to Persist in the Environment.嗜肺军团菌：一种高度敏感的机会性水传播病原体在环境中持续存在的悖论。
Front Microbiol. 2016 Apr 8;7:486. doi: 10.3389/fmicb.2016.00486. eCollection 2016.