• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

来自南非的食蛞蝓蛇(有鳞目,穴蝰科)中隐存种的分子证据。

Molecular evidence for cryptic species in the common slug eating snake (Squamata, Lamprophiidae) from South Africa.

作者信息

Kulenkampff Kyle, Van Zyl Francois, Klaus Sebastian, Daniels Savel R

机构信息

Department of Botany and Zoology, Private Bag X1, Stellenbosch University, Matieland, 7602, South Africa Stellenbosch University Stellenbosch South Africa.

Department of Ecology and Evolution, J. W. Goethe-University, Biologicum, Frankfurt am Main, Germany J. W. Goethe-University Frankfurt Germany.

出版信息

Zookeys. 2019 Apr 15;838:133-154. doi: 10.3897/zookeys.838.32022. eCollection 2019.

DOI:10.3897/zookeys.838.32022
PMID:31048972
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6477839/
Abstract

We examined the impact of climatic fluctuations on the phylogeographic structure of the common slug eating snake () throughout its distribution in South Africa. The evolutionary history within the taxon was examined using partial DNA sequence data for two mitochondrial genes (ND4 + cyt ) in combination with a nuclear locus (SPTBN1). Phylogenetic relationships were investigated for both the combined mtDNA and total evidence DNA sequence data. In addition, population and demographic analyses together with divergence time estimations were conducted on the combined mtDNA data. Topologies derived from the combined mtDNA analyses and the total evidence analyses were congruent and retrieved five statistically well-supported clades, suggesting that represents a species complex. The five clades were generally allopatric, separated by altitudinal barriers and characterised by the absence of shared mtDNA haplotypes suggesting long term isolation. Divergence time estimations indicate that the diversification within the species complex occurred during the Plio/Pleistocene as a result of climatic fluctuations and habitat shifts for the species. A taxonomic revision of the species complex may be required to delineate possible species boundaries.

摘要

我们研究了气候波动对南非普通食蛞蝓蛇()整个分布范围内系统地理结构的影响。利用两个线粒体基因(ND4 + cyt )的部分DNA序列数据结合一个核基因座(SPTBN1),研究了该分类单元内的进化历史。对合并的线粒体DNA和总证据DNA序列数据进行了系统发育关系研究。此外,对合并的线粒体DNA数据进行了种群和人口统计学分析以及分歧时间估计。来自合并线粒体DNA分析和总证据分析的拓扑结构是一致的,并检索到五个统计学上得到充分支持的分支,这表明 代表一个物种复合体。这五个分支通常是异域分布的,被海拔障碍隔开,其特征是没有共享的线粒体DNA单倍型,表明长期隔离。分歧时间估计表明,该物种复合体的多样化发生在上新世/更新世期间,是该物种气候波动和栖息地变化的结果。可能需要对该物种复合体进行分类修订,以划定可能的物种界限。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c797/6477839/311673286934/zookeys-838-133-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c797/6477839/9da7615eb026/zookeys-838-133-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c797/6477839/c76f97adfeea/zookeys-838-133-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c797/6477839/5fc57cf0161c/zookeys-838-133-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c797/6477839/311673286934/zookeys-838-133-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c797/6477839/9da7615eb026/zookeys-838-133-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c797/6477839/c76f97adfeea/zookeys-838-133-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c797/6477839/5fc57cf0161c/zookeys-838-133-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c797/6477839/311673286934/zookeys-838-133-g004.jpg

相似文献

1
Molecular evidence for cryptic species in the common slug eating snake (Squamata, Lamprophiidae) from South Africa.来自南非的食蛞蝓蛇(有鳞目,穴蝰科)中隐存种的分子证据。
Zookeys. 2019 Apr 15;838:133-154. doi: 10.3897/zookeys.838.32022. eCollection 2019.
2
Living with the genetic signature of Miocene induced change: evidence from the phylogeographic structure of the endemic angulate tortoise Chersina angulata.与中新世诱导变化的遗传特征共存:来自特有角龟Chersina angulata系统发育地理结构的证据。
Mol Phylogenet Evol. 2007 Dec;45(3):915-26. doi: 10.1016/j.ympev.2007.08.010. Epub 2007 Aug 30.
3
Pliocene-Pleistocene lineage diversifications in the Eastern Indigo Snake (Drymarchon couperi) in the Southeastern United States.美国东南部东部靛蓝蛇(Drymarchon couperi)上新世-更新世的谱系多样化。
Mol Phylogenet Evol. 2016 May;98:111-22. doi: 10.1016/j.ympev.2015.12.022. Epub 2016 Jan 9.
4
Diversifying into the branches: Species boundaries in African green and bush snakes, Philothamnus (Serpentes: Colubridae).分支多样化:非洲绿树蟒和灌木蛇属(蛇目:游蛇科)中的物种界限。
Mol Phylogenet Evol. 2019 Jan;130:357-365. doi: 10.1016/j.ympev.2018.10.023. Epub 2018 Oct 23.
5
Between the Cape Fold Mountains and the deep blue sea: Comparative phylogeography of selected codistributed ectotherms reveals asynchronous cladogenesis.在开普褶皱山脉与深蓝色大海之间:对部分同域分布变温动物的比较系统地理学研究揭示了异步分支形成。
Evol Appl. 2022 Oct 27;15(12):1967-1987. doi: 10.1111/eva.13493. eCollection 2022 Dec.
6
Phylogeography reveals an ancient cryptic radiation in East-Asian tree frogs (Hyla japonica group) and complex relationships between continental and island lineages.系统发育地理学揭示了东亚树蛙(日本林蛙组)中一个古老的隐秘辐射现象以及大陆和岛屿谱系之间的复杂关系。
BMC Evol Biol. 2016 Nov 23;16(1):253. doi: 10.1186/s12862-016-0814-x.
7
Phylogeny and biogeography of the African burrowing snake subfamily Aparallactinae (Squamata: Lamprophiidae).非洲穴居蛇亚科(有鳞目: Lamprophiidae)的系统发育和生物地理学。
Mol Phylogenet Evol. 2018 Oct;127:288-303. doi: 10.1016/j.ympev.2018.03.019. Epub 2018 Mar 15.
8
Diversification and evolutionary history of the African laminated-toothed rats (Rodentia, Otomyini).非洲层齿鼠(啮齿目,非洲鼠科)的多样性和进化历史。
Mol Phylogenet Evol. 2023 Jun;183:107779. doi: 10.1016/j.ympev.2023.107779. Epub 2023 Apr 3.
9
An integrative taxonomic revision of slug-eating snakes (Squamata: Pareidae: Pareineae) reveals unprecedented diversity in Indochina.对食蛞蝓蛇类(有鳞目:蚰蜒科:蚰蜒蚰科)的综合分类修订揭示了印度支那前所未有的多样性。
PeerJ. 2022 Jan 10;10:e12713. doi: 10.7717/peerj.12713. eCollection 2022.
10
The influence of Pleistocene climatic changes and ocean currents on the phylogeography of the southern African barnacle, Tetraclita serrata (Thoracica; Cirripedia).更新世气候变化和洋流对南非藤壶Tetraclita serrata(围胸目;蔓足亚纲)系统地理学的影响。
PLoS One. 2014 Jul 23;9(7):e102115. doi: 10.1371/journal.pone.0102115. eCollection 2014.

引用本文的文献

1
Between the Cape Fold Mountains and the deep blue sea: Comparative phylogeography of selected codistributed ectotherms reveals asynchronous cladogenesis.在开普褶皱山脉与深蓝色大海之间:对部分同域分布变温动物的比较系统地理学研究揭示了异步分支形成。
Evol Appl. 2022 Oct 27;15(12):1967-1987. doi: 10.1111/eva.13493. eCollection 2022 Dec.
2
Phylogenetic analyses of distantly related clades of bent-toed geckos (genus Cyrtodactylus) reveal an unprecedented amount of cryptic diversity in northern and western Thailand.对弯趾壁虎(属 Cyrtodactylus)的远缘分支进行系统发育分析,揭示了泰国北部和西部前所未有的隐存多样性。
Sci Rep. 2021 Jan 27;11(1):2328. doi: 10.1038/s41598-020-70640-8.

本文引用的文献

1
Phylogeny, biogeography and classification of the snake superfamily Elapoidea: a rapid radiation in the late Eocene.眼镜蛇超科的系统发育、生物地理学与分类:始新世晚期的快速辐射分化
Cladistics. 2009 Feb;25(1):38-63. doi: 10.1111/j.1096-0031.2008.00237.x. Epub 2009 Jan 5.
2
Phylogeny and biogeography of the African burrowing snake subfamily Aparallactinae (Squamata: Lamprophiidae).非洲穴居蛇亚科(有鳞目: Lamprophiidae)的系统发育和生物地理学。
Mol Phylogenet Evol. 2018 Oct;127:288-303. doi: 10.1016/j.ympev.2018.03.019. Epub 2018 Mar 15.
3
CONFIDENCE LIMITS ON PHYLOGENIES: AN APPROACH USING THE BOOTSTRAP.
系统发育树的置信区间:一种使用自展法的方法。
Evolution. 1985 Jul;39(4):783-791. doi: 10.1111/j.1558-5646.1985.tb00420.x.
4
A Species-Level Phylogeny of Extant Snakes with Description of a New Colubrid Subfamily and Genus.现存蛇类的科级系统发育及一个新游蛇亚科和属的描述
PLoS One. 2016 Sep 7;11(9):e0161070. doi: 10.1371/journal.pone.0161070. eCollection 2016.
5
Comparing species tree estimation with large anchored phylogenomic and small Sanger-sequenced molecular datasets: an empirical study on Malagasy pseudoxyrhophiine snakes.比较大型锚定系统发育基因组学和小型桑格测序分子数据集的物种树估计:马达加斯加伪蝰蛇的实证研究
BMC Evol Biol. 2015 Oct 12;15:221. doi: 10.1186/s12862-015-0503-1.
6
The origin of snakes: revealing the ecology, behavior, and evolutionary history of early snakes using genomics, phenomics, and the fossil record.蛇的起源:利用基因组学、表型组学和化石记录揭示早期蛇类的生态、行为和进化史。
BMC Evol Biol. 2015 May 20;15:87. doi: 10.1186/s12862-015-0358-5.
7
Coalescent species delimitation in milksnakes (genus Lampropeltis) and impacts on phylogenetic comparative analyses.乳蛇属(Lampropeltis)的并合种物种界定及其对系统发育比较分析的影响。
Syst Biol. 2014 Mar;63(2):231-50. doi: 10.1093/sysbio/syt099. Epub 2013 Dec 10.
8
Ain't no mountain high enough, ain't no valley low enough? Phylogeography of the rupicolous Cape girdled lizard (Cordylus cordylus) reveals a generalist pattern.山高路远不足惧,海阔天空任我行?岩生海角蜥(Cordylus cordylus)的系统地理学揭示了一种广适性模式。
Mol Phylogenet Evol. 2014 Feb;71:234-48. doi: 10.1016/j.ympev.2013.10.015. Epub 2013 Oct 31.
9
Phylogeography of the widespread African puff adder (Bitis arietans) reveals multiple Pleistocene refugia in southern Africa.广泛分布的非洲树蛇(Bitis arietans)的系统地理学揭示了南部非洲多个更新世避难所。
Mol Ecol. 2013 Feb;22(4):1134-57. doi: 10.1111/mec.12157. Epub 2013 Jan 3.
10
jModelTest 2: more models, new heuristics and parallel computing.jModelTest 2:更多模型、新启发式方法与并行计算。
Nat Methods. 2012 Jul 30;9(8):772. doi: 10.1038/nmeth.2109.