Institute for Physical Chemistry, Christian-Albrechts-University, Olshausenstr. 40, 24098, Kiel, Germany.
Department of Chemistry, University College London, Gower Street, London, WC1E 6BT, United Kingdom.
J Comput Chem. 2019 Aug 15;40(22):1978-1989. doi: 10.1002/jcc.25853. Epub 2019 May 8.
We employ nondeterministic global cluster structure optimization, based on the evolutionary algorithms paradigm, to model the self-assembly of complex molecules on a surface. As a real-life application example directly related to many recent experiments, we use this approach for the assembly of triazatriangulene "platform" molecules on the Au(111) surface. Without additional restrictions like spatial discretizations, coarse-graining or precalculated adsorption poses, and despite the proof-of-principle character of this study, we achieve satisfactory qualitative agreement with several experimental observations and can provide answers to questions that experiments on these species had left open so far. © 2019 Wiley Periodicals, Inc.
我们采用基于进化算法范例的非确定性全局聚类结构优化方法来模拟复杂分子在表面上的自组装。作为与许多最新实验直接相关的实际应用示例,我们使用这种方法来组装三嗪并三嗪“平台”分子在 Au(111)表面上。在没有额外限制(如空间离散化、粗粒化或预先计算的吸附构象)的情况下,尽管这项研究具有原理验证性质,但我们仍然与几个实验观察结果达成了令人满意的定性一致,并能够回答到目前为止这些物种的实验留下的问题。© 2019 年 Wiley 期刊出版公司