Goh's BioComputing, Singapore 548957, Singapore.
Center for Computational Biology, Indiana and Bioinformatics, Indiana University School of Medicine, Indianapolis, IN 46202, USA.
Biomolecules. 2019 May 8;9(5):178. doi: 10.3390/biom9050178.
Hundreds of billions of dollars have been spent for over three decades in the search for an effective human immunodeficiency virus (HIV) vaccine with no success. There are also at least two other sexually transmitted viruses, for which no vaccine is available, the herpes simplex virus (HSV) and the hepatitis C virus (HCV). Traditional textbook explanatory paradigm of rapid mutation of retroviruses cannot adequately address the unavailability of vaccine for many sexually transmissible viruses, since HSV and HCV are DNA and non-retroviral RNA viruses, respectively, whereas effective vaccine for the horsefly-transmitted retroviral cousin of HIV, equine infectious anemia virus (EIAV), was found in 1973. We reported earlier the highly disordered nature of proteins in outer shells of the HIV, HCV, and HSV. Such levels of disorder are completely absent among the classical viruses, such as smallpox, rabies, yellow fever, and polio viruses, for which efficient vaccines were discovered. This review analyzes the physiology and shell disorder of the various related and non-related viruses to argue that EIAV and the classical viruses need harder shells to survive during harsher conditions of non-sexual transmissions, thus making them vulnerable to antibody detection and neutralization. In contrast, the outer shell of the HIV-1 (with its preferential sexual transmission) is highly disordered, thereby allowing large scale motions of its surface glycoproteins and making it difficult for antibodies to bind to them. The theoretical underpinning of this concept is retrospectively traced to a classical 1920s experiment by the legendary scientist, Oswald Avery. This concept of viral shapeshifting has implications for improved treatment of cancer and infections via immune evasion.
几十年来,人们已经花费了数千亿美元来寻找一种有效的人类免疫缺陷病毒 (HIV) 疫苗,但都没有成功。还有至少另外两种性传播病毒,即单纯疱疹病毒 (HSV) 和丙型肝炎病毒 (HCV),目前尚无疫苗。传统教科书对逆转录病毒快速突变的解释范式不能充分说明许多性传播病毒无法获得疫苗的原因,因为 HSV 和 HCV 分别是 DNA 和非逆转录 RNA 病毒,而有效的疫苗针对的是 HIV 的马蝇传播的逆转录病毒表亲,即马传染性贫血病毒 (EIAV),于 1973 年发现。我们之前报道过 HIV、HCV 和 HSV 外壳蛋白的高度无序性质。在天花、狂犬病、黄热病和脊髓灰质炎等经典病毒中,完全不存在这种无序程度,这些病毒都发现了有效的疫苗。这篇综述分析了各种相关和不相关病毒的生理学和外壳无序性,认为 EIAV 和经典病毒需要更坚硬的外壳才能在非性传播的更恶劣条件下存活,从而使它们容易受到抗体的检测和中和。相比之下,HIV-1 的外壳(其偏好性传播)高度无序,从而允许其表面糖蛋白进行大规模运动,使抗体难以与之结合。这一概念的理论基础可以追溯到传奇科学家 Oswald Avery 在 20 世纪 20 年代的经典实验。这种病毒形状变化的概念对改善癌症和感染的免疫逃避治疗具有重要意义。