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遗传学筛选突出了 CPL3、RST1 和 URT1 在 RNA 代谢和沉默中的新作用。

A genetics screen highlights emerging roles for CPL3, RST1 and URT1 in RNA metabolism and silencing.

机构信息

Department of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, Belgium.

VIB Center for Plant Systems Biology, Ghent, Belgium.

出版信息

Nat Plants. 2019 May;5(5):539-550. doi: 10.1038/s41477-019-0419-7. Epub 2019 May 10.

Abstract

Post-transcriptional gene silencing (PTGS) is a major mechanism regulating gene expression in higher eukaryotes. To identify novel players in PTGS, a forward genetics screen was performed on an Arabidopsis thaliana line overexpressing a strong growth-repressive gene, ETHYLENE RESPONSE FACTOR6 (ERF6). We identified six independent ethyl-methanesulfonate mutants rescuing the dwarfism of ERF6-overexpressing plants as a result of transgene silencing. Among the causative genes, ETHYLENE-INSENSITIVE5, SUPERKILLER2 and HASTY1 have previously been reported to inhibit PTGS. Notably, the three other causative genes have not, to date, been related to PTGS: UTP:RNA-URIDYLYLTRANSFERASE1 (URT1), C-TERMINAL DOMAIN PHOSPHATASE-LIKE3 (CPL3) and RESURRECTION1 (RST1). We show that these genes may participate in protecting the 3' end of transgene transcripts. We present a model in which URT1, CPL3 and RST1 are classified as PTGS suppressors, as compromisation of these genes provokes the accumulation of aberrant transcripts which, in turn, trigger the production of small interfering RNAs, initiating RNA silencing.

摘要

转录后基因沉默(PTGS)是高等真核生物中调节基因表达的主要机制。为了鉴定 PTGS 的新成员,我们对拟南芥中过表达强生长抑制基因 ETHYLENE RESPONSE FACTOR6(ERF6)的品系进行了正向遗传学筛选。我们鉴定了六个独立的甲基磺酸乙酯突变体,这些突变体通过转基因沉默拯救了 ERF6 过表达植物的矮化。在这些致病基因中,ETHYLENE-INSENSITIVE5、SUPERKILLER2 和 HASTY1 之前被报道抑制 PTGS。值得注意的是,迄今为止,另外三个致病基因与 PTGS 没有关系:UTP:RNA-URIDYLYLTRANSFERASE1(URT1)、C-TERMINAL DOMAIN PHOSPHATASE-LIKE3(CPL3)和 RESURRECTION1(RST1)。我们表明这些基因可能参与保护转基因转录物的 3' 端。我们提出了一个模型,其中 URT1、CPL3 和 RST1 被归类为 PTGS 抑制剂,因为这些基因的缺陷会导致异常转录本的积累,进而触发小干扰 RNA 的产生,启动 RNA 沉默。

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