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强迫症(OCD)和精神分裂症常见关键基因的蛋白质-蛋白质相互作用分析:迈向新的药物治疗方法 强迫症(OCD)与精神分裂症共病基因分析

Protein-Protein Interaction Analysis of Common Top Genes in Obsessive-Compulsive Disorder (OCD) and Schizophrenia: Towards New Drug Approach Obsessive-Compulsive disorder (OCD) and Schizophrenia Comorbidity Gene Analysis.

作者信息

Mahboubi Mohammad, Zamanian Azodi Mona, Rezaei Tavirani Mostafa, Mansouri Vahid, Ali Ahmadi Nayeb, Hamdieh Mostafa, Rezaei Tavirani Majid, Naghavi Gargari Bahar

机构信息

Abadan School of Medical Sciences, Abadan, Iran.

Proteomics Research Center, Faculty of Paramedical Sciences, Shahid Beheshti University of Medical Sciences, Tehran, Iran.

出版信息

Iran J Pharm Res. 2018;17(Suppl2):173-186.

Abstract

Comorbidty is common among psychiatric disorders including obsessive-compulsive disorder and schizophrenia with a high rate. Many studies suggested that the disorders may have same etiological bases. In this regard, shared pathways of glutamate, dopaminergic, and serotonin are the known ones. Here, the common significant genes are examined to understand the possible molecular origin of the disorders in terms of sequence and functional features. Exploring the underling mechanisms of OCD and schizophrenia is important to achieve a better treatment options. Methods of Cytoscape software following R statistical software were applied for this purpose. Needleman-Wunsch global alignment algorithm was used to determine pair-wise similarities followed by clustering methods, AGNES and PAM in R statistical programming software. The results indicate that SLC1A1, DRD2, DRD4, BDNF, ESR1, CDH2, GRIN2B, TNFa, GABBR1, and OLIG2 are significantly common for the two disorders and PPI network analysis showed the important key genes in the interaction profile. ESR1 (estrogen receptor α) as a key hub-bottleneck gene regulates many underling mechanisms of the brain. Application of global alignments indicates some of the genes with sequence similarities also elucidate similar biological terms.

摘要

共病在包括强迫症和精神分裂症在内的精神障碍中很常见,且发生率很高。许多研究表明,这些障碍可能有相同的病因基础。在这方面,谷氨酸、多巴胺能和5-羟色胺的共同通路是已知的。在此,研究常见的重要基因,以便从序列和功能特征方面了解这些障碍可能的分子起源。探索强迫症和精神分裂症的潜在机制对于获得更好的治疗方案很重要。为此应用了R统计软件之后的Cytoscape软件方法。使用Needleman-Wunsch全局比对算法来确定成对相似性,随后在R统计编程软件中采用聚类方法AGNES和PAM。结果表明,SLC1A1、DRD2、DRD4、BDNF、ESR1、CDH2、GRIN2B、TNFα、GABBR1和OLIG2在这两种障碍中显著常见,蛋白质-蛋白质相互作用(PPI)网络分析显示了相互作用图谱中的重要关键基因。ESR1(雌激素受体α)作为关键的枢纽瓶颈基因,调控大脑的许多潜在机制。全局比对的应用表明,一些具有序列相似性的基因也阐明了相似的生物学术语。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bfef/6447879/67ec125bb35d/ijpr-17-173-g001.jpg

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