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为重要的作物病原菌 构建基因组序列资源

Genome Sequence Resource for , an Important Pathogenic Fungus Threatening Crop Production.

机构信息

Shenzhen Branch, Guangdong Laboratory for Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, 440307, Shenzhen, China.

State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, 100193, Beijing, China.

出版信息

Mol Plant Microbe Interact. 2021 Jul;34(7):835-838. doi: 10.1094/MPMI-11-20-0311-A. Epub 2021 Aug 25.

Abstract

is an important phytopathogenic fungus with a broad host range. Here, we report an annotated draft of the genome of field strain GZL1 collected from maize assembled from PacBio and Illumina sequencing reads. The assembly we obtained has 15 scaffolds with an N length of 4,037,616 bp. The resulting GZL1 draft genome is 43,214,190 bp, with GC content of 58.19%. The completeness of GZL1 genome assembly is 99.30%. This study is the first report of the genome sequence of , which can facilitate future study of the genetic variation and pathogenic mechanism of this important fungal pathogen.[Formula: see text] Copyright © 2021 The Author(s). This is an open access article distributed under the CC BY-NC-ND 4.0 International license.

摘要

是一种重要的植物病原真菌,具有广泛的宿主范围。在这里,我们报道了从玉米中采集的田间菌株 GZL1 的基因组注释草案,该菌株由 PacBio 和 Illumina 测序reads 组装而成。我们获得的组装有 15 个支架,N 长度为 4037616bp。由此产生的 GZL1 草案基因组为 43214190bp,GC 含量为 58.19%。GZL1 基因组组装的完整性为 99.30%。本研究首次报道了 的基因组序列,这有助于未来研究该重要真菌病原体的遗传变异和致病机制。[公式:见正文] 版权所有 © 2021 作者。这是一个在 CC BY-NC-ND 4.0 国际许可下的开放获取文章。

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