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1
The thermophilic biomass-degrading bacterium utilizes two enzymes to oxidize glyceraldehyde 3-phosphate during glycolysis.嗜热生物量降解菌利用两种酶在糖酵解过程中氧化甘油醛 3-磷酸。
J Biol Chem. 2019 Jun 21;294(25):9995-10005. doi: 10.1074/jbc.RA118.007120. Epub 2019 May 16.
2
A New Class of Tungsten-Containing Oxidoreductase in Caldicellulosiruptor, a Genus of Plant Biomass-Degrading Thermophilic Bacteria.嗜热栖热菌属中一类新型含钨氧化还原酶,嗜热栖热菌属是一类能降解植物生物质的嗜热细菌。
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3
Glyceraldehyde-3-phosphate ferredoxin oxidoreductase, a novel tungsten-containing enzyme with a potential glycolytic role in the hyperthermophilic archaeon Pyrococcus furiosus.3-磷酸甘油醛铁氧还蛋白氧化还原酶,一种新型含钨酶,在嗜热古菌激烈火球菌中可能具有糖酵解作用。
J Biol Chem. 1995 Apr 14;270(15):8389-92. doi: 10.1074/jbc.270.15.8389.
4
Metabolic engineering of for 2,3-butanediol production from unpretreated lignocellulosic biomass and metabolic strategies for improving yields and titers.从未经预处理的木质纤维素生物质生产 2,3-丁二醇的代谢工程和提高产量和浓度的代谢策略。
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5
Steady-state kinetics of the tungsten containing aldehyde: ferredoxin oxidoreductases from the hyperthermophilic archaeon Pyrococcus furiosus.过热水生菌 Pyrococcus furiosus 中含钨的醛:铁氧还蛋白氧化还原酶的稳态动力学。
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6
Engineering redox-balanced ethanol production in the cellulolytic and extremely thermophilic bacterium, .在纤维素分解且嗜热的细菌中构建氧化还原平衡的乙醇生产。 (原英文文本不完整,推测可能是“Engineering redox-balanced ethanol production in the cellulolytic and extremely thermophilic bacterium, [具体细菌名称].” )
Metab Eng Commun. 2018 May 28;7:e00073. doi: 10.1016/j.mec.2018.e00073. eCollection 2018 Dec.
7
The ferredoxin-dependent conversion of glyceraldehyde-3-phosphate in the hyperthermophilic archaeon Pyrococcus furiosus represents a novel site of glycolytic regulation.嗜热古菌激烈火球菌中依赖铁氧化还原蛋白的3-磷酸甘油醛转化代表了糖酵解调控的一个新位点。
J Biol Chem. 1998 Oct 23;273(43):28149-54. doi: 10.1074/jbc.273.43.28149.
8
The novel tungsten-iron-sulfur protein of the hyperthermophilic archaebacterium, Pyrococcus furiosus, is an aldehyde ferredoxin oxidoreductase. Evidence for its participation in a unique glycolytic pathway.嗜热古细菌激烈火球菌的新型钨铁硫蛋白是一种醛铁氧化还原蛋白氧化还原酶。其参与独特糖酵解途径的证据。
J Biol Chem. 1991 Aug 5;266(22):14208-16.
9
Genome-Scale Metabolic Model of Reveals Optimal Metabolic Engineering Strategies for Bio-based Chemical Production.[具体生物名称]的基因组规模代谢模型揭示了基于生物的化学品生产的最佳代谢工程策略。 (原文中“of”后缺少具体生物名称)
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Functional Analysis of the Glucan Degradation Locus in Caldicellulosiruptor bescii Reveals Essential Roles of Component Glycoside Hydrolases in Plant Biomass Deconstruction.功能分析表明,卡尔迪克氏纤维菌的葡聚糖降解位点中的糖苷水解酶在植物生物质的解构中起着重要作用。
Appl Environ Microbiol. 2017 Dec 1;83(24). doi: 10.1128/AEM.01828-17. Print 2017 Dec 15.

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Tungsten is utilized for lactate consumption and SCFA production by a dominant human gut microbe .钨被一种主要的人类肠道微生物用于消耗乳酸和产生短链脂肪酸。
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3
The potential of native and engineered Clostridia for biomass biorefining.天然及工程改造的梭菌在生物质生物精炼中的潜力。
Front Bioeng Biotechnol. 2024 Aug 16;12:1423935. doi: 10.3389/fbioe.2024.1423935. eCollection 2024.
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Sugar transport in thermophiles: Bridging lignocellulose deconstruction and bioconversion.嗜热菌中的糖转运:连接木质纤维素的解构和生物转化。
J Ind Microbiol Biotechnol. 2024 Jan 9;51. doi: 10.1093/jimb/kuae020.
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Metabolic engineering of Caldicellulosiruptor bescii for hydrogen production.贝氏柯氏纤维梭菌的产氢代谢工程。
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Obligately aerobic human gut microbe expresses an oxygen resistant tungsten-containing oxidoreductase for detoxifying gut aldehydes.专性需氧的人体肠道微生物表达一种耐氧的含钨氧化还原酶,用于肠道醛类解毒。
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An essential role for tungsten in the ecology and evolution of a previously uncultivated lineage of anaerobic, thermophilic Archaea.钨在以前未培养的厌氧嗜热古菌谱系的生态学和进化中的重要作用。
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Contemporary Use of ICSI and Epigenetic Risks to Future Generations.卵胞浆内单精子注射技术的当代应用及对后代的表观遗传风险。
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本文引用的文献

1
Identification of YdhV as the First Molybdoenzyme Binding a Bis-Mo-MPT Cofactor in Escherichia coli.鉴定 YdhV 为第一个结合大肠杆菌中二钼-MPT 辅因子的钼酶。
Biochemistry. 2019 Apr 30;58(17):2228-2242. doi: 10.1021/acs.biochem.9b00078. Epub 2019 Apr 17.
2
Characterization of an Aldehyde Oxidoreductase From the Mesophilic Bacterium EbN1, a Member of a New Subfamily of Tungsten-Containing Enzymes.嗜温细菌EbN1中一种醛氧化还原酶的特性研究,EbN1是含钨酶新亚家族的成员
Front Microbiol. 2019 Jan 31;10:71. doi: 10.3389/fmicb.2019.00071. eCollection 2019.
3
Engineering redox-balanced ethanol production in the cellulolytic and extremely thermophilic bacterium, .在纤维素分解且嗜热的细菌中构建氧化还原平衡的乙醇生产。 (原英文文本不完整,推测可能是“Engineering redox-balanced ethanol production in the cellulolytic and extremely thermophilic bacterium, [具体细菌名称].” )
Metab Eng Commun. 2018 May 28;7:e00073. doi: 10.1016/j.mec.2018.e00073. eCollection 2018 Dec.
4
Deletion of the Clostridium thermocellum recA gene reveals that it is required for thermophilic plasmid replication but not plasmid integration at homologous DNA sequences.缺失热纤梭菌 recA 基因表明其对嗜热质体复制是必需的,但对同源 DNA 序列上的质粒整合则非必需。
J Ind Microbiol Biotechnol. 2018 Aug;45(8):753-763. doi: 10.1007/s10295-018-2049-x. Epub 2018 May 28.
5
Rex in Caldicellulosiruptor bescii: Novel regulon members and its effect on the production of ethanol and overflow metabolites.在 Caldicellulosiruptor bescii 中 Rex 的作用:新型调控子成员及其对乙醇和副产物生成的影响。
Microbiologyopen. 2019 Feb;8(2):e00639. doi: 10.1002/mbo3.639. Epub 2018 May 23.
6
Native xylose-inducible promoter expands the genetic tools for the biomass-degrading, extremely thermophilic bacterium Caldicellulosiruptor bescii.天然木糖诱导型启动子扩展了用于生物质降解极端嗜热细菌嗜热栖热放线菌的遗传工具。
Extremophiles. 2018 Jul;22(4):629-638. doi: 10.1007/s00792-018-1023-x. Epub 2018 May 24.
7
Genus-Wide Assessment of Lignocellulose Utilization in the Extremely Thermophilic Genus Caldicellulosiruptor by Genomic, Pangenomic, and Metagenomic Analyses.通过基因组、泛基因组和宏基因组分析对极度嗜热属 Caldicellulosiruptor 中的木质纤维素利用进行全属评估。
Appl Environ Microbiol. 2018 Apr 16;84(9). doi: 10.1128/AEM.02694-17. Print 2018 May 1.
8
ModelFinder: fast model selection for accurate phylogenetic estimates.ModelFinder:用于准确系统发育估计的快速模型选择
Nat Methods. 2017 Jun;14(6):587-589. doi: 10.1038/nmeth.4285. Epub 2017 May 8.
9
Deletion of Type I glutamine synthetase deregulates nitrogen metabolism and increases ethanol production in Clostridium thermocellum.Ⅰ型谷氨酰胺合成酶缺失使嗜热梭菌的氮代谢失调并增加乙醇产量。
Metab Eng. 2017 May;41:182-191. doi: 10.1016/j.ymben.2017.04.002. Epub 2017 Apr 8.
10
Extremely thermophilic energy metabolisms: biotechnological prospects.极端嗜热生物的能量代谢:生物技术前景
Curr Opin Biotechnol. 2017 Jun;45:104-112. doi: 10.1016/j.copbio.2017.02.016. Epub 2017 Mar 16.

嗜热生物量降解菌利用两种酶在糖酵解过程中氧化甘油醛 3-磷酸。

The thermophilic biomass-degrading bacterium utilizes two enzymes to oxidize glyceraldehyde 3-phosphate during glycolysis.

机构信息

From the Department of Biochemistry and Molecular Biology and.

New Materials Institute, University of Georgia, Athens, Georgia 30602.

出版信息

J Biol Chem. 2019 Jun 21;294(25):9995-10005. doi: 10.1074/jbc.RA118.007120. Epub 2019 May 16.

DOI:10.1074/jbc.RA118.007120
PMID:31097544
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6597818/
Abstract

is an extremely thermophilic, cellulolytic bacterium with a growth optimum at 78 °C and is the most thermophilic cellulose degrader known. It is an attractive target for biotechnological applications, but metabolic engineering will require an in-depth understanding of its primary pathways. A previous analysis of its genome uncovered evidence that may have a completely uncharacterized aspect to its redox metabolism, involving a tungsten-containing oxidoreductase of unknown function. Herein, we purified and characterized this new member of the aldehyde ferredoxin oxidoreductase family of tungstoenzymes. We show that it is a heterodimeric glyceraldehyde-3-phosphate (GAP) ferredoxin oxidoreductase (GOR) present not only in all known species, but also in 44 mostly anaerobic bacterial genera. GOR is phylogenetically distinct from the monomeric GAP-oxidizing enzyme found previously in several Archaea. We found that its large subunit (GOR-L) contains a single tungstopterin site and one iron-sulfur [4Fe-4S] cluster, that the small subunit (GOR-S) contains four [4Fe-4S] clusters, and that GOR uses ferredoxin as an electron acceptor. Deletion of either subunit resulted in a distinct growth phenotype on both C and C sugars, with an increased lag phase, but higher cell densities. Using metabolomics and kinetic analyses, we show that GOR functions in parallel with the conventional GAP dehydrogenase, providing an alternative ferredoxin-dependent glycolytic pathway. These two pathways likely facilitate the recycling of reduced redox carriers (NADH and ferredoxin) in response to environmental H concentrations. This metabolic flexibility has important implications for the future engineering of this and related species.

摘要

是一种极端嗜热的纤维素分解菌,最适生长温度为 78°C,是已知最耐热的纤维素降解菌。它是生物技术应用的有吸引力的目标,但代谢工程将需要深入了解其主要途径。对其基因组的先前分析表明,可能具有其氧化还原代谢完全未知的方面,涉及一种未知功能的含钨氧化还原酶。在此,我们纯化并表征了这种钨酶醛-铁氧还蛋白氧化还原酶家族的新成员。我们表明,它是一种甘油醛-3-磷酸(GAP)铁氧还蛋白氧化还原酶(GOR)的杂二聚体,不仅存在于所有已知的物种中,而且存在于 44 个主要厌氧细菌属中。GOR 在系统发育上与先前在几种古菌中发现的单体 GAP 氧化酶不同。我们发现,其大亚基(GOR-L)含有一个单一的钨喋呤位点和一个铁-硫 [4Fe-4S] 簇,小亚基(GOR-S)含有四个 [4Fe-4S] 簇,并且 GOR 以铁氧还蛋白作为电子受体。缺失任一亚基都会导致在 C 和 C 糖上明显的生长表型,延滞期延长,但细胞密度增加。通过代谢组学和动力学分析,我们表明 GOR 与传统的 GAP 脱氢酶平行发挥作用,提供了一种替代的铁氧还蛋白依赖性糖酵解途径。这两种途径可能有助于在环境 H+浓度下回收还原氧化还原载体(NADH 和铁氧还蛋白)。这种代谢灵活性对未来对该和相关物种的工程改造具有重要意义。