Faculty of Medicine, Department of Microbiology, University of Tartu, Tartu, Estonia.
Faculty of Medicine, Department of Microbiology, University of Tartu, Tartu, Estonia.
Infect Genet Evol. 2019 Nov;75:103901. doi: 10.1016/j.meegid.2019.05.019. Epub 2019 May 28.
Due to the widespread use of non-nucleoside reverse transcriptase inhibitors (NNRTI) as part of first-line therapies to curb the human immunodeficiency virus (HIV) epidemic in Eastern-European countries, transmitted drug resistance (TDR) is of serious concern in this region. Therefore, TDR and its associated risk factors were investigated among newly diagnosed HIV-1 subjects in Estonia.
This nationwide observational study included all newly diagnosed HIV-1 subjects from January 1 until December 31, 2013. Demographic and clinical data were collected using the national surveillance system and the Estonian HIV-positive patient database (E-HIV). Starting from RNA, the HIV-1 protease (PR) and reverse transcriptase (RT) region was sequenced and surveillance drug resistance mutations (SDRM) were determined. Sequences from previous studies in Estonia and from public databases were included to study epidemic trends and to determine TDR clusters by phylogenetic analysis.
Out of 325 newly diagnosed HIV-1 infections, 224 were successfully sequenced (68%). As in previous studies from Estonia, the circulating recombinant form CRF06_cpx was the most prevalent HIV subtype (164/224, 74%). Fifteen strains displayed SDRM, giving a TDR rate of 6.7% (95% CI 3.9; 11.0). The most common SDRMs were associated with NNRTI (10/15, 4.5%), followed by PI (3/15, 1.3%) and NRTI (2/15, 0.9%). K103 N (8/15, 53%) was the most common SDRM. The level of TDR and mutational patterns were comparable to previous years. Twenty-six transmission clusters containing Estonian sequences were observed, of which 23/26 belonged to CRF06_cpx and 2/26 displayed evidence of TDR. The only risk factor associated with the presence of TDR was imprisonment (OR 5.187, CI 1.139-25.565, p = 0.034).
TDR remained stable at a moderate level in Estonia, K103N is the main SDRM with only one transmission-pair detected. We suggest screening for TDR at the time of diagnosis or prior to antiretroviral treatment initiation to tailor first-line regimens accordingly.
The third consecutive transmitted drug resistance (TDR) study demonstrated a stable TDR in Estonia. TDR reached 6.7% (moderate level) in 2013, with imprisonment being the only associated risk factor. Few drug resistance-associated transmission clusters were identified.
由于非核苷类逆转录酶抑制剂(NNRTI)在遏制东欧国家的人类免疫缺陷病毒(HIV)流行的一线治疗中广泛使用,因此该地区对传播性耐药(TDR)的关注尤为严重。因此,在爱沙尼亚,对新诊断出的 HIV-1 患者进行了 TDR 及其相关危险因素的研究。
这是一项全国性的观察性研究,纳入了 2013 年 1 月 1 日至 12 月 31 日期间所有新诊断出的 HIV-1 患者。使用国家监测系统和爱沙尼亚 HIV 阳性患者数据库(E-HIV)收集人口统计学和临床数据。从 RNA 开始,对 HIV-1 蛋白酶(PR)和逆转录酶(RT)区进行测序,并确定监测耐药突变(SDRM)。同时,还分析了以前在爱沙尼亚和公共数据库中的研究序列,以研究流行趋势并通过系统进化分析确定 TDR 聚类。
在 325 例新诊断的 HIV-1 感染中,有 224 例成功测序(68%)。与以前爱沙尼亚的研究一样,循环重组形式 CRF06_cpx 是最常见的 HIV 亚型(164/224,74%)。15 株显示出 SDRM,TDR 率为 6.7%(95%CI 3.9;11.0)。最常见的 SDRMs 与 NNRTI 相关(10/15,4.5%),其次是 PI(3/15,1.3%)和 NRTI(2/15,0.9%)。K103N(8/15,53%)是最常见的 SDRM。TDR 的水平和突变模式与前几年相似。观察到包含爱沙尼亚序列的 26 个传播群,其中 23/26 属于 CRF06_cpx,2/26 显示出 TDR 的证据。唯一与 TDR 存在相关的危险因素是监禁(OR 5.187,CI 1.139-25.565,p=0.034)。
在爱沙尼亚,TDR 保持在中等水平稳定,K103N 是主要的 SDRM,仅检测到一对传播。建议在诊断时或在开始抗逆转录病毒治疗前进行 TDR 筛查,以便相应地调整一线治疗方案。
第三次连续的传播性耐药(TDR)研究表明,爱沙尼亚的 TDR 保持稳定。2013 年 TDR 达到 6.7%(中等水平),唯一相关的危险因素是监禁。仅确定了少数与耐药相关的传播群。