• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

KaiC 的 ATP 水解促进了其在蓝藻生物钟系统中与 KaiA 的结合。

ATP hydrolysis by KaiC promotes its KaiA binding in the cyanobacterial circadian clock system.

机构信息

Graduate School of Pharmaceutical Sciences, Nagoya City University, Nagoya, Japan.

Institute for Molecular Science, National Institutes of Natural Sciences, Okazaki, Japan.

出版信息

Life Sci Alliance. 2019 Jun 3;2(3). doi: 10.26508/lsa.201900368. Print 2019 Jun.

DOI:10.26508/lsa.201900368
PMID:31160381
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6549140/
Abstract

The cyanobacterial clock is controlled via the interplay among KaiA, KaiB, and KaiC, which generate a periodic oscillation of KaiC phosphorylation in the presence of ATP. KaiC forms a homohexamer harboring 12 ATP-binding sites and exerts ATPase activities associated with its autophosphorylation and dephosphorylation. The KaiC nucleotide state is a determining factor of the KaiB-KaiC interaction; however, its relationship with the KaiA-KaiC interaction has not yet been elucidated. With the attempt to address this, our native mass spectrometric analyses indicated that ATP hydrolysis in the KaiC hexamer promotes its interaction with KaiA. Furthermore, our nuclear magnetic resonance spectral data revealed that ATP hydrolysis is coupled with conformational changes in the flexible C-terminal segments of KaiC, which carry KaiA-binding sites. From these data, we conclude that ATP hydrolysis in KaiC is coupled with the exposure of its C-terminal KaiA-binding sites, resulting in its high affinity for KaiA. These findings provide mechanistic insights into the ATP-mediated circadian periodicity.

摘要

蓝藻钟是通过 KaiA、KaiB 和 KaiC 之间的相互作用来控制的,在 ATP 的存在下,KaiC 会发生周期性的磷酸化振荡。KaiC 形成一个含有 12 个 ATP 结合位点的同六聚体,并发挥与其自身磷酸化和去磷酸化相关的 ATP 酶活性。KaiC 的核苷酸状态是决定 KaiB-KaiC 相互作用的因素;然而,其与 KaiA-KaiC 相互作用的关系尚未阐明。为了解决这个问题,我们的天然质谱分析表明,KaiC 六聚体中的 ATP 水解促进了它与 KaiA 的相互作用。此外,我们的核磁共振波谱数据显示,ATP 水解与 KaiC 柔性 C 末端片段的构象变化相关联,这些片段携带 KaiA 结合位点。根据这些数据,我们得出结论,KaiC 中的 ATP 水解与 C 末端 KaiA 结合位点的暴露相关联,导致其与 KaiA 具有高亲和力。这些发现为 ATP 介导的生物钟周期性提供了机制上的见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f622/6549140/064c2627c2cf/LSA-2019-00368_Fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f622/6549140/a373ae3d2469/LSA-2019-00368_Fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f622/6549140/f3b241611fd5/LSA-2019-00368_FigS1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f622/6549140/671e108a9832/LSA-2019-00368_FigS2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f622/6549140/a95d99df9e36/LSA-2019-00368_FigS3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f622/6549140/a48007402105/LSA-2019-00368_FigS4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f622/6549140/50c767a98feb/LSA-2019-00368_FigS5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f622/6549140/57dad9f1719e/LSA-2019-00368_FigS6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f622/6549140/feacc07557e7/LSA-2019-00368_Fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f622/6549140/064c2627c2cf/LSA-2019-00368_Fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f622/6549140/a373ae3d2469/LSA-2019-00368_Fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f622/6549140/f3b241611fd5/LSA-2019-00368_FigS1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f622/6549140/671e108a9832/LSA-2019-00368_FigS2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f622/6549140/a95d99df9e36/LSA-2019-00368_FigS3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f622/6549140/a48007402105/LSA-2019-00368_FigS4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f622/6549140/50c767a98feb/LSA-2019-00368_FigS5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f622/6549140/57dad9f1719e/LSA-2019-00368_FigS6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f622/6549140/feacc07557e7/LSA-2019-00368_Fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f622/6549140/064c2627c2cf/LSA-2019-00368_Fig3.jpg

相似文献

1
ATP hydrolysis by KaiC promotes its KaiA binding in the cyanobacterial circadian clock system.KaiC 的 ATP 水解促进了其在蓝藻生物钟系统中与 KaiA 的结合。
Life Sci Alliance. 2019 Jun 3;2(3). doi: 10.26508/lsa.201900368. Print 2019 Jun.
2
Cooperative Binding of KaiB to the KaiC Hexamer Ensures Accurate Circadian Clock Oscillation in Cyanobacteria.KaiB 与 KaiC 六聚体的协同结合确保了蓝藻生物钟的精确振荡。
Int J Mol Sci. 2019 Sep 13;20(18):4550. doi: 10.3390/ijms20184550.
3
The ATP-mediated regulation of KaiB-KaiC interaction in the cyanobacterial circadian clock.ATP 介导的蓝藻生物钟中 KaiB-KaiC 相互作用的调节。
PLoS One. 2013 Nov 11;8(11):e80200. doi: 10.1371/journal.pone.0080200. eCollection 2013.
4
Exchange of ADP with ATP in the CII ATPase domain promotes autophosphorylation of cyanobacterial clock protein KaiC.ADP 与 CII ATPase 结构域内 ATP 的交换促进了蓝藻生物钟蛋白 KaiC 的自身磷酸化。
Proc Natl Acad Sci U S A. 2014 Mar 25;111(12):4455-60. doi: 10.1073/pnas.1319353111. Epub 2014 Mar 10.
5
Rhythmic adenosine triphosphate release from the cyanobacterial circadian clock protein KaiC revealed by real-time monitoring of bioluminescence using firefly luciferase.利用萤火虫荧光素酶实时监测生物发光揭示蓝藻生物钟蛋白 KaiC 的节律性三磷酸腺苷释放。
Genes Cells. 2021 Feb;26(2):83-93. doi: 10.1111/gtc.12825. Epub 2021 Jan 17.
6
Conversion between two conformational states of KaiC is induced by ATP hydrolysis as a trigger for cyanobacterial circadian oscillation.KaiC 两种构象状态之间的转换是由 ATP 水解诱导的,作为蓝藻生物钟振荡的触发因素。
Sci Rep. 2016 Sep 1;6:32443. doi: 10.1038/srep32443.
7
Cooperative KaiA-KaiB-KaiC interactions affect KaiB/SasA competition in the circadian clock of cyanobacteria.KaiA-KaiB-KaiC 合作相互作用影响蓝藻生物钟中 KaiB/SasA 的竞争。
J Mol Biol. 2014 Jan 23;426(2):389-402. doi: 10.1016/j.jmb.2013.09.040. Epub 2013 Oct 7.
8
A dynamic interaction process between KaiA and KaiC is critical to the cyanobacterial circadian oscillator.KaiA与KaiC之间的动态相互作用过程对蓝藻生物钟振荡器至关重要。
Sci Rep. 2016 Apr 26;6:25129. doi: 10.1038/srep25129.
9
Nature of KaiB-KaiC binding in the cyanobacterial circadian oscillator.在蓝藻生物钟振荡器中 KaiB-KaiC 结合的性质。
Cell Cycle. 2013 Mar 1;12(5):810-7. doi: 10.4161/cc.23757. Epub 2013 Feb 6.
10
Loop-loop interactions regulate KaiA-stimulated KaiC phosphorylation in the cyanobacterial KaiABC circadian clock.环loop 相互作用调节蓝藻 KaiABC 生物钟中 KaiA 刺激的 KaiC 磷酸化。
Biochemistry. 2013 Feb 19;52(7):1208-20. doi: 10.1021/bi301691a. Epub 2013 Feb 7.

引用本文的文献

1
Determining subunit-subunit interaction from statistics of cryo-EM images: observation of nearest-neighbor coupling in a circadian clock protein complex.从冷冻电镜图像的统计数据中确定亚基-亚基相互作用:在生物钟蛋白复合物中观察最近邻耦合。
Nat Commun. 2023 Sep 22;14(1):5907. doi: 10.1038/s41467-023-41575-1.
2
The increasing role of structural proteomics in cyanobacteria.结构蛋白质组学在蓝藻中的作用日益增大。
Essays Biochem. 2023 Mar 29;67(2):269-282. doi: 10.1042/EBC20220095.
3
Regulation mechanisms of the dual ATPase in KaiC.凯氏蛋白中双ATP酶的调控机制

本文引用的文献

1
Molecular dynamics simulations of nucleotide release from the circadian clock protein KaiC reveal atomic-resolution functional insights.分子动力学模拟揭示了生物钟蛋白 KaiC 释放核苷酸的原子分辨率功能见解。
Proc Natl Acad Sci U S A. 2018 Dec 4;115(49):E11475-E11484. doi: 10.1073/pnas.1812555115. Epub 2018 Nov 15.
2
Revealing circadian mechanisms of integration and resilience by visualizing clock proteins working in real time.实时可视化时钟蛋白的工作,揭示整合和弹性的生物钟机制。
Nat Commun. 2018 Aug 14;9(1):3245. doi: 10.1038/s41467-018-05438-4.
3
Conformational rearrangements of the C1 ring in KaiC measure the timing of assembly with KaiB.
Proc Natl Acad Sci U S A. 2022 May 10;119(19):e2119627119. doi: 10.1073/pnas.2119627119. Epub 2022 May 4.
4
Bayesian modeling reveals metabolite-dependent ultrasensitivity in the cyanobacterial circadian clock.贝叶斯建模揭示了蓝藻生物钟中依赖代谢物的超敏性。
Mol Syst Biol. 2020 Jun;16(6):e9355. doi: 10.15252/msb.20199355.
5
Myosin and Other Energy-Transducing ATPases: Structural Dynamics Studied by Electron Paramagnetic Resonance.肌球蛋白和其他能量转换 ATP 酶:电子顺磁共振研究的结构动力学。
Int J Mol Sci. 2020 Jan 20;21(2):672. doi: 10.3390/ijms21020672.
6
Orchestration of Circadian Timing by Macromolecular Protein Assemblies.大分子蛋白质组装对生物钟的调控。
J Mol Biol. 2020 May 29;432(12):3426-3448. doi: 10.1016/j.jmb.2019.12.046. Epub 2020 Jan 13.
C1 环构象重排可测量 KaiC 与 KaiB 组装的时间。
Sci Rep. 2018 Jun 11;8(1):8803. doi: 10.1038/s41598-018-27131-8.
4
Structural basis of the day-night transition in a bacterial circadian clock.细菌生物钟中昼夜转换的结构基础。
Science. 2017 Mar 17;355(6330):1174-1180. doi: 10.1126/science.aag2516. Epub 2017 Mar 16.
5
Structural characterization of the circadian clock protein complex composed of KaiB and KaiC by inverse contrast-matching small-angle neutron scattering.通过逆对比匹配小角中子散射对由 KaiB 和 KaiC 组成的生物钟蛋白复合物的结构特征进行分析。
Sci Rep. 2016 Oct 18;6:35567. doi: 10.1038/srep35567.
6
Protein-Protein Interactions in the Cyanobacterial Circadian Clock: Structure of KaiA Dimer in Complex with C-Terminal KaiC Peptides at 2.8 Å Resolution.蓝藻生物钟中的蛋白质-蛋白质相互作用:与C端KaiC肽形成复合物的KaiA二聚体的2.8埃分辨率结构
Biochemistry. 2015 Aug 4;54(30):4575-8. doi: 10.1021/acs.biochem.5b00694. Epub 2015 Jul 24.
7
Mixtures of opposing phosphorylations within hexamers precisely time feedback in the cyanobacterial circadian clock.六聚体内相反磷酸化的混合物精确地调控蓝藻生物钟中的反馈时间。
Proc Natl Acad Sci U S A. 2014 Sep 16;111(37):E3937-45. doi: 10.1073/pnas.1408692111. Epub 2014 Sep 2.
8
An arginine tetrad as mediator of input-dependent and input-independent ATPases in the clock protein KaiC.精氨酸四联体作为生物钟蛋白KaiC中依赖输入和不依赖输入的ATP酶的介质。
Acta Crystallogr D Biol Crystallogr. 2014 May;70(Pt 5):1375-90. doi: 10.1107/S1399004714003228. Epub 2014 Apr 30.
9
Exchange of ADP with ATP in the CII ATPase domain promotes autophosphorylation of cyanobacterial clock protein KaiC.ADP 与 CII ATPase 结构域内 ATP 的交换促进了蓝藻生物钟蛋白 KaiC 的自身磷酸化。
Proc Natl Acad Sci U S A. 2014 Mar 25;111(12):4455-60. doi: 10.1073/pnas.1319353111. Epub 2014 Mar 10.
10
Site-directed spin labeling-electron spin resonance mapping of the residues of cyanobacterial clock protein KaiA that are affected by KaiA-KaiC interaction.通过定点自旋标记-电子自旋共振技术对受 KaiA-KaiC 相互作用影响的蓝藻生物钟蛋白 KaiA 残基进行定位。
Genes Cells. 2014 Apr;19(4):297-324. doi: 10.1111/gtc.12130. Epub 2014 Feb 4.