Pirog Agathe, Jaquemet Sébastien, Ravigné Virginie, Cliff Geremy, Clua Eric, Holmes Bonnie J, Hussey Nigel E, Nevill John E G, Temple Andrew J, Berggren Per, Vigliola Laurent, Magalon Hélène
UMR ENTROPIE (Université de La Réunion/IRD/CNRS) Université de La Réunion Saint Denis, La Réunion France.
UMR PVBMT CIRAD St Pierre, La Réunion France.
Ecol Evol. 2019 May 4;9(10):5551-5571. doi: 10.1002/ece3.5111. eCollection 2019 May.
Population genetics has been increasingly applied to study large sharks over the last decade. Whilst large shark species are often difficult to study with direct methods, improved knowledge is needed for both population management and conservation, especially for species vulnerable to anthropogenic and climatic impacts. The tiger shark, , is an apex predator known to play important direct and indirect roles in tropical and subtropical marine ecosystems. While the global and Indo-West Pacific population genetic structure of this species has recently been investigated, questions remain over population structure and demographic history within the western Indian (WIO) and within the western Pacific Oceans (WPO). To address the knowledge gap in tiger shark regional population structures, the genetic diversity of 286 individuals sampled in seven localities was investigated using 27 microsatellite loci and three mitochondrial genes (, and ). A weak genetic differentiation was observed between the WIO and the WPO, suggesting high genetic connectivity. This result agrees with previous studies and highlights the importance of the pelagic behavior of this species to ensure gene flow. Using approximate Bayesian computation to couple information from both nuclear and mitochondrial markers, evidence of a recent bottleneck in the Holocene (2,000-3,000 years ago) was found, which is the most probable cause for the low genetic diversity observed. A contemporary effective population size as low as 111 [43,369] was estimated during the bottleneck. Together, these results indicate low genetic diversity that may reflect a vulnerable population sensitive to regional pressures. Conservation measures are thus needed to protect a species that is classified as Near Threatened.
在过去十年中,群体遗传学越来越多地被应用于大型鲨鱼的研究。虽然大型鲨鱼物种通常很难用直接方法进行研究,但为了种群管理和保护,尤其是对于易受人为和气候影响的物种,我们需要更多的了解。虎鲨是一种顶级掠食者,在热带和亚热带海洋生态系统中发挥着重要的直接和间接作用。虽然最近已经对该物种的全球和印度 - 西太平洋群体遗传结构进行了调查,但在西印度洋(WIO)和西太平洋(WPO)内的种群结构和种群历史方面仍存在问题。为了填补虎鲨区域种群结构方面的知识空白,我们使用27个微卫星位点和三个线粒体基因(、和)对在七个地点采集的286个个体的遗传多样性进行了调查。在WIO和WPO之间观察到较弱的遗传分化,这表明遗传连通性较高。这一结果与之前的研究一致,并突出了该物种的远洋行为对确保基因流动的重要性。使用近似贝叶斯计算来结合来自核标记和线粒体标记的信息,发现了全新世(2000 - 3000年前)近期瓶颈的证据,这是观察到的低遗传多样性的最可能原因。在瓶颈期估计当代有效种群大小低至111 [43,369]。总之,这些结果表明遗传多样性较低,这可能反映了一个对区域压力敏感的脆弱种群。因此,需要采取保护措施来保护这种被列为近危的物种。