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PartitionFinder 2:用于选择分子和形态系统发育分析进化分区模型的新方法。

PartitionFinder 2: New Methods for Selecting Partitioned Models of Evolution for Molecular and Morphological Phylogenetic Analyses.

机构信息

Research School of Biology, Australian National University, Canberra, ACT, Australia.

Department of Biological Sciences, Macquarie University, Sydney, Australia.

出版信息

Mol Biol Evol. 2017 Mar 1;34(3):772-773. doi: 10.1093/molbev/msw260.

DOI:10.1093/molbev/msw260
PMID:28013191
Abstract

PartitionFinder 2 is a program for automatically selecting best-fit partitioning schemes and models of evolution for phylogenetic analyses. PartitionFinder 2 is substantially faster and more efficient than version 1, and incorporates many new methods and features. These include the ability to analyze morphological datasets, new methods to analyze genome-scale datasets, new output formats to facilitate interoperability with downstream software, and many new models of molecular evolution. PartitionFinder 2 is freely available under an open source license and works on Windows, OSX, and Linux operating systems. It can be downloaded from www.robertlanfear.com/partitionfinder. The source code is available at https://github.com/brettc/partitionfinder.

摘要

PartitionFinder 2 是一个用于自动选择适合的分区方案和进化模型的程序,用于系统发育分析。PartitionFinder 2 比版本 1 快得多,效率也更高,并集成了许多新方法和功能。这些包括分析形态数据集的能力、分析基因组规模数据集的新方法、新的输出格式,以方便与下游软件的互操作,以及许多新的分子进化模型。PartitionFinder 2 是根据开源许可证免费提供的,可在 Windows、OSX 和 Linux 操作系统上运行。它可以从 www.robertlanfear.com/partitionfinder 下载。源代码可在 https://github.com/brettc/partitionfinder 获得。

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