Suppr超能文献

分析微卫星不稳定亚型结肠癌的转录组特征。

Analysis of the transcriptomic features of microsatellite instability subtype colon cancer.

机构信息

Fujian Key Laboratory for Prenatal Diagnosis and Birth Defect, Fujian Provincial Maternity and Children's Hospital, affiliated hospital of Fujian Medical University, FuZhou, FuJian, China.

Key Laboratory of Technical Evaluation of Fertility Regulation for Non-human Primate, National Health and Family Planning Commission, FuZhou, FuJian, China.

出版信息

BMC Cancer. 2019 Jun 20;19(1):605. doi: 10.1186/s12885-019-5802-2.

Abstract

BACKGROUND

Programmed cell death protein 1(PD-1) blocking antibodies have been used to enhance immunity in solid tumors and achieve durable clinical responses with an acceptable safety profile in multiple types of cancer. However, only a subset of patients could benefit from PD-1 blockade therapy. Prognostic information including PD-1 ligand (PD-L1) expression, IFN-γ expression signature, tumor mutational burden, and microsatellite instability (MSI) have been evaluated for patients who are selected to receive immune checkpoint therapeutic treatment. Yet the relationship of those biomarkers in determining immune checkpoint therapy is largely unknown.

METHODS

Immune-profiles of MSI subtype colon cancer were identified from integrating published MSI associated gene expression data. The enriched pathways and transcription factors were analyzed by GSEA assay. The infiltrations of immune cell types into MSI subtype colon cancer tissues were determined by CIBESORT assay.

RESULTS

In the MSI subtype colon cancer patients, PD-L1, IFN-γ and IFN-γ associated genes are highly expressed. And all those genes are favorable effects in colon cancer progress. In addition, we find that Wnt-β-catenin and TGFβ signaling pathways which are two important factors inhibiting PD-1 checkpoint blockade therapy are negatively related with MSI status. We also identify that the immune-profiles in MSI subtype colon cancer are contributed by M1 macrophage infiltration in the tumor environment.

CONCLUSIONS

Our results provide the detailed underlying mechanisms of MSI subtype cancer patients are sensitive to PD-1 checkpoint blockade.

摘要

背景

程序性死亡蛋白 1(PD-1)阻断抗体已被用于增强实体瘤的免疫力,并在多种癌症中实现了持久的临床反应和可接受的安全性。然而,只有一部分患者能从 PD-1 阻断治疗中获益。PD-1 配体(PD-L1)表达、IFN-γ表达特征、肿瘤突变负担和微卫星不稳定性(MSI)等预后信息已被评估用于选择接受免疫检查点治疗的患者。然而,这些生物标志物在确定免疫检查点治疗中的关系在很大程度上是未知的。

方法

从整合发表的 MSI 相关基因表达数据中确定 MSI 亚型结肠癌的免疫特征。通过 GSEA 分析富集的通路和转录因子。通过 CIBESORT 分析确定免疫细胞类型浸润到 MSI 亚型结肠癌组织中。

结果

在 MSI 亚型结肠癌患者中,PD-L1、IFN-γ 和 IFN-γ 相关基因高表达。所有这些基因在结肠癌的进展中都有有利的影响。此外,我们发现,抑制 PD-1 检查点阻断治疗的两条重要途径——Wnt-β-catenin 和 TGFβ 信号通路与 MSI 状态呈负相关。我们还发现,MSI 亚型结肠癌的免疫特征是由肿瘤微环境中 M1 巨噬细胞浸润所贡献的。

结论

我们的研究结果为 MSI 亚型癌症患者对 PD-1 检查点阻断敏感的详细潜在机制提供了依据。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/acae/6585086/fbf5411049b9/12885_2019_5802_Fig1_HTML.jpg

相似文献

1
Analysis of the transcriptomic features of microsatellite instability subtype colon cancer.
BMC Cancer. 2019 Jun 20;19(1):605. doi: 10.1186/s12885-019-5802-2.
7
Successful immune checkpoint blockade in a patient with advanced stage microsatellite-unstable biliary tract cancer.
Cold Spring Harb Mol Case Stud. 2017 Sep 1;3(5). doi: 10.1101/mcs.a001974. Print 2017 Sep.

引用本文的文献

1
The role of TMEM119 in gastric adenocarcinoma and its specific effects on immunity.
J Int Med Res. 2025 Apr;53(4):3000605241306668. doi: 10.1177/03000605241306668. Epub 2025 Apr 12.
3
Unique miRNA Expression Profile in MSI- and EMAST-Unstable Sporadic Colon Cancer.
Genes (Basel). 2024 Aug 1;15(8):1007. doi: 10.3390/genes15081007.
6
Challenges and Therapeutic Opportunities in the dMMR/MSI-H Colorectal Cancer Landscape.
Cancers (Basel). 2023 Feb 6;15(4):1022. doi: 10.3390/cancers15041022.
7
RNA Sequencing Data for FFPE Tumor Blocks Can Be Used for Robust Estimation of Tumor Mutation Burden in Individual Biosamples.
Front Oncol. 2021 Sep 28;11:732644. doi: 10.3389/fonc.2021.732644. eCollection 2021.
8
Macrophages, as a Promising Strategy to Targeted Treatment for Colorectal Cancer Metastasis in Tumor Immune Microenvironment.
Front Immunol. 2021 Jul 13;12:685978. doi: 10.3389/fimmu.2021.685978. eCollection 2021.

本文引用的文献

1
Macrophages impede CD8 T cells from reaching tumor cells and limit the efficacy of anti-PD-1 treatment.
Proc Natl Acad Sci U S A. 2018 Apr 24;115(17):E4041-E4050. doi: 10.1073/pnas.1720948115. Epub 2018 Apr 9.
2
The Immune Landscape of Cancer.
Immunity. 2018 Apr 17;48(4):812-830.e14. doi: 10.1016/j.immuni.2018.03.023. Epub 2018 Apr 5.
3
Comparative Molecular Analysis of Gastrointestinal Adenocarcinomas.
Cancer Cell. 2018 Apr 9;33(4):721-735.e8. doi: 10.1016/j.ccell.2018.03.010. Epub 2018 Apr 2.
4
Oncogenic JAK2 causes PD-L1 expression, mediating immune escape in myeloproliferative neoplasms.
Sci Transl Med. 2018 Feb 21;10(429). doi: 10.1126/scitranslmed.aam7729.
5
TGFβ drives immune evasion in genetically reconstituted colon cancer metastasis.
Nature. 2018 Feb 22;554(7693):538-543. doi: 10.1038/nature25492. Epub 2018 Feb 14.
6
TGFβ attenuates tumour response to PD-L1 blockade by contributing to exclusion of T cells.
Nature. 2018 Feb 22;554(7693):544-548. doi: 10.1038/nature25501. Epub 2018 Feb 14.
8
A major chromatin regulator determines resistance of tumor cells to T cell-mediated killing.
Science. 2018 Feb 16;359(6377):770-775. doi: 10.1126/science.aao1710. Epub 2018 Jan 4.
9
10
DNA double-strand break repair pathway regulates PD-L1 expression in cancer cells.
Nat Commun. 2017 Nov 24;8(1):1751. doi: 10.1038/s41467-017-01883-9.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验