• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

基于多个核和质体区域的 Goodyerinae(兰科 Cranichideae、Orchidoideae)的分子系统发育。

Molecular systematics of Goodyerinae (Cranichideae, Orchidoideae, Orchidaceae) based on multiple nuclear and plastid regions.

机构信息

Key Laboratory of National Forestry and Grassland Administration for Orchid Conservation and Utilization, Fujian Agriculture and Forestry University, Fuzhou 350002, China.

School of Life Sciences, East China Normal University, Shanghai 200241, China.

出版信息

Mol Phylogenet Evol. 2019 Oct;139:106542. doi: 10.1016/j.ympev.2019.106542. Epub 2019 Jun 20.

DOI:10.1016/j.ympev.2019.106542
PMID:31229601
Abstract

Goodyerinae are one of the most species-rich and widespread subtribes of Orchidaceae but notorious for their taxonomic difficulty. Here, a comprehensive molecular phylogenetic study of the subtribe is presented based on two nuclear (ITS, Xdh) and five plastid (matK, psaB, rbcL, trnL, trnL-F) regions. A total of 119 species were included representing all clades recovered by previous phylogenetic analyses as well as seven outgroups. Maximum parsimony, maximum likelihood and Bayesian inference methods were used to infer the phylogenetic relationships. The results show that the Goodyerinae subdivided into three major subdivisions and six groupings: Pachyplectron, Goodyera clade (including Goodyera procera, Microchilus subclade and Goodyera subclade) and Cheirostylis clade (including Gonatostylis, Cheirostylis subclade and Ludisia subclade). Four genera, Erythrodes, Goodyera, Myrmechis and Odontochilus, are not monophyletic. The results support Odontochilus s. l. to include Myrmechis and Kuhlhasseltia. The systematic positions of Goodyera procera and two isolated genera, Herpysma and Orchipedum, are difficult to determine.

摘要

好耶兰亚族是兰科中物种最丰富、分布最广泛的亚族之一,但因其分类困难而声名狼藉。本研究基于两个核基因(ITS、Xdh)和五个质体基因(matK、psaB、rbcL、trnL、trnL-F),对该亚族进行了全面的分子系统发育研究。共包括 119 个物种,代表了先前系统发育分析中恢复的所有进化枝以及 7 个外群。使用最大简约法、最大似然法和贝叶斯推断法推断系统发育关系。结果表明,好耶兰亚族分为三个主要分支和六个分组:Pachyplectron、Goodyera 进化枝(包括 Goodyera procera、Microchilus 亚组和 Goodyera 亚组)和 Cheirostylis 进化枝(包括 Gonatostylis、Cheirostylis 亚组和 Ludisia 亚组)。四个属 Erythrodes、Goodyera、Myrmechis 和 Odontochilus 不是单系的。结果支持将 Odontochilus s. l. 包括 Myrmechis 和 Kuhlhasseltia。Goodyera procera 和两个孤立属 Herpysma 和 Orchipedum 的系统发育位置难以确定。

相似文献

1
Molecular systematics of Goodyerinae (Cranichideae, Orchidoideae, Orchidaceae) based on multiple nuclear and plastid regions.基于多个核和质体区域的 Goodyerinae(兰科 Cranichideae、Orchidoideae)的分子系统发育。
Mol Phylogenet Evol. 2019 Oct;139:106542. doi: 10.1016/j.ympev.2019.106542. Epub 2019 Jun 20.
2
Phylogenetic Analysis of a 'Jewel Orchid' Genus Goodyera (Orchidaceae) Based on DNA Sequence Data from Nuclear and Plastid Regions.基于核区和质体区DNA序列数据对“宝石兰”属斑叶兰(兰科)的系统发育分析
PLoS One. 2016 Feb 29;11(2):e0150366. doi: 10.1371/journal.pone.0150366. eCollection 2016.
3
Phylogenetic relationships of Cranichidinae and Prescottiinae (Orchidaceae, Cranichideae) inferred from plastid and nuclear DNA sequences.基于质体和核DNA序列推断的克兰尼希亚科和普雷斯科特亚科(兰科,克兰尼希德亚科)的系统发育关系
Ann Bot. 2009 Aug;104(3):403-16. doi: 10.1093/aob/mcn257. Epub 2009 Jan 9.
4
Plastid phylogenomics improves resolution of phylogenetic relationship in the Cheirostylis and Goodyera clades of Goodyerinae (Orchidoideae, Orchidaceae).质体系统发育基因组学提高了对羊耳蒜亚族(兰科,兰亚科)中的叉柱兰属和斑叶兰属分支系统发育关系的解析度。
Mol Phylogenet Evol. 2021 Nov;164:107269. doi: 10.1016/j.ympev.2021.107269. Epub 2021 Jul 27.
5
Phylogenetics of subtribe Orchidinae s.l. (Orchidaceae; Orchidoideae) based on seven markers (plastid matK, psaB, rbcL, trnL-F, trnH-psba, and nuclear nrITS, Xdh): implications for generic delimitation.基于 7 个标记(质体 matK、psaB、rbcL、trnL-F、trnH-psba 和核 nrITS、Xdh)的 Orchidinae s.l.(兰科;Orchidoideae)亚族系统发育:对属的划分的影响。
BMC Plant Biol. 2017 Nov 25;17(1):222. doi: 10.1186/s12870-017-1160-x.
6
Phylogenetic relationships amongst the African genera of subtribe Orchidinae s.l. (Orchidaceae; Orchideae): Implications for subtribal and generic delimitations.非洲兰亚族(兰科;兰亚族)各属间的系统发育关系:对亚族和属的界限的启示。
Mol Phylogenet Evol. 2020 Dec;153:106946. doi: 10.1016/j.ympev.2020.106946. Epub 2020 Aug 27.
7
Molecular phylogeny of Gavilea (Chloraeinae: Orchidaceae) using plastid and nuclear markers.利用质体和核标记对 Gavilea(Chloraeinae:兰科)进行分子系统发育研究。
Mol Phylogenet Evol. 2012 Mar;62(3):889-97. doi: 10.1016/j.ympev.2011.11.026. Epub 2011 Dec 8.
8
Phylogenetics of Cranichideae with emphasis on Spiranthinae (Orchidaceae, Orchidoideae): evidence from plastid and nuclear DNA sequences.石豆兰族系统发育研究(重点为沼兰亚族):来自质体和核 DNA 序列的证据。
Am J Bot. 2003 May;90(5):777-95. doi: 10.3732/ajb.90.5.777.
9
Phylogenetics and biogeography of Mascarene angraecoid orchids (Vandeae, Orchidaceae).马斯克林群岛安格兰类兰花(万代兰族,兰科)的系统发育学与生物地理学
Mol Phylogenet Evol. 2008 Mar;46(3):908-22. doi: 10.1016/j.ympev.2007.12.001. Epub 2007 Dec 14.
10
A phylogenetic study of Laeliinae (Orchidaceae) based on combined nuclear and plastid DNA sequences.基于核DNA和质体DNA序列组合的蕾丽兰亚族(兰科)系统发育研究
Ann Bot. 2009 Aug;104(3):417-30. doi: 10.1093/aob/mcp101. Epub 2009 May 7.

引用本文的文献

1
Progress in systematics and biogeography of Orchidaceae.兰科植物系统学与生物地理学研究进展。
Plant Divers. 2024 May 16;46(4):425-434. doi: 10.1016/j.pld.2024.05.002. eCollection 2024 Jul.
2
 (Mazaceae), a new species from China: evidence from morphological and molecular analyses.中国产灯藓科(提灯藓科)一新种:形态学和分子分析证据
PhytoKeys. 2024 Apr 9;241:81-90. doi: 10.3897/phytokeys.241.117787. eCollection 2024.
3
Molecular Phylogeny and Historical Biogeography of R. Br. (Orchidaceae): A Case of the Vicariance Between East Asia and North America.
红门兰属(兰科)的分子系统发育与历史生物地理学:以东亚和北美之间的间断分布为例
Front Plant Sci. 2022 May 2;13:850170. doi: 10.3389/fpls.2022.850170. eCollection 2022.
4
 (Orchidaceae), a new species from Tibet, China.中国西藏兰科一新种。
PhytoKeys. 2022 Feb 14;189:141-154. doi: 10.3897/phytokeys.189.77374. eCollection 2022.
5
New contributions to Goodyerinae and Dendrobiinae (Orchidaceae) in the flora of China.中国植物区系中Goodyerinae亚族和石斛亚族(兰科)的新分类群
Plant Divers. 2021 Jun 4;43(5):362-378. doi: 10.1016/j.pld.2021.05.006. eCollection 2021 Oct.
6
The specific DNA barcodes based on chloroplast genes for species identification of Orchidaceae plants.基于叶绿体基因的特定 DNA 条码用于兰科植物的物种鉴定。
Sci Rep. 2021 Jan 14;11(1):1424. doi: 10.1038/s41598-021-81087-w.
7
Complete plastid genome of (Orchidaceae, Goodyerinae).(兰科,斑叶兰亚族)的完整质体基因组。
Mitochondrial DNA B Resour. 2019 Dec 11;5(1):127-128. doi: 10.1080/23802359.2019.1698347.
8
Characterization of sequence variability hotspots in Cranichideae plastomes (Orchidaceae, Orchidoideae).描述 Cranichideae 质体(兰科,Orchidoideae)序列变异热点。
PLoS One. 2020 Jan 28;15(1):e0227991. doi: 10.1371/journal.pone.0227991. eCollection 2020.